Neisseria gonorrhoeae NGSJH9 |
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Putative Neisseria gonorrhoeae NGSJH9 RM systems
Ref: Mac Aogain,M. et al. unpublished
REBASE ref # 24516
Contig set: 2,120,291 bp
GenBank #: NAGN00000000 (NZ_NAGN00000000)
REBASE acronym: NgoJH9
Org_num: 24584
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1 | Uncharacterized protein | |||
| 2 | M | M.NgoWSI (100% identity) | M.NgoJH9ORFAP | |
| 5 | 90 aa hypothetical protein | |||
| 98 | 131 aa hypothetical protein | |||
| 99 | R | NgoWPIP (100% identity) | NgoJH9ORFJP | |
| 104 | 68 aa hypothetical protein | |||
| 105 | Uncharacterized protein | |||
| 106 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoJH9ORFKP |
| 107 | Uncharacterized protein | |||
| 345 | Uncharacterized protein | |||
| 348 | M | M.NgoSH240ORFMP (100% identity) | GCANNNNNNNNTGC | M.NgoJH9ORFNP |
| 351 | Damage-inducible protein D | |||
| 352 | 117 aa hypothetical protein | |||
| 353 | 104 aa hypothetical protein | |||
| 354 | Uncharacterized protein | |||
| ??? | S | S1.Ngo7292ORF3265P (100% identity) | GCANNNNNNNNTGC | S.NgoJH9ORFNP |
| 357 | Restriction endonuclease subunit S | |||
| 358 | 69 aa hypothetical protein | |||
| 359 | 101 aa hypothetical protein | |||
| 360 | 62 aa hypothetical protein | |||
| 361 | Transposase | |||
| 362 | R | NgoNCORF566P (100% identity) | GCANNNNNNNNTGC | NgoJH9ORFNP |
| 367 | Uncharacterized protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3 | UvrABC system protein A | |||
| 5 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoJH9ORFBP |
| 8 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoJH9ORFBP |
| 10 | Uncharacterized protein | |||
| 5 | 3-isopropylmalate dehydrogenase | |||
| 9 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoJH9ORFIP |
| 13 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoJH9ORFIP |
| 14 | 3-isopropylmalate dehydratase small subunit | |||
| 10 | Uncharacterized protein | |||
| ??? | M | M.NgoWPORF8P (100% identity) | M.NgoJH9ORFOP | |
| ??? | Dam-replacing protein | |||
| ??? | pseudogene | |||
| ??? | R | Ngos1291ORF5750P (100% identity) | GATC | NgoJH9ORFPP |
| 18 | Uncharacterized protein | |||
| 14 | 69 aa hypothetical protein | |||
| 15 | V | V.Ngos1291ORF65P (100% identity) | V.NgoJH9ORFHP | |
| ??? | R | NgoWSORF1801P (98% identity) | NgoJH9ORFHP | |
| ??? | M | M.NgoWSORF1801P (100% identity) | M.NgoJH9ORFHP | |
| 27 | 86 aa hypothetical protein | |||
| 55 | Phenylalanine--tRNA ligase beta subunit | |||
| 59 | R | NgoWSORF391P (100% identity) | NgoJH9ORFSP | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoJH9ORFSP | |
| 65 | V | V.NgoWSORF391P (100% identity) | V.NgoJH9ORFSP | |
| 67 | Phenylalanine--tRNA ligase alpha subunit | |||
| 49 | 105 aa hypothetical protein | |||
| 52 | R | NgoWFIIP (100% identity) | GGTGA | NgoJH9ORFQP |
| 53 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.NgoJH9ORFQP |
| 54 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.NgoJH9ORFQP |
| 55 | Uncharacterized protein | |||
| 141 | Cysteine--tRNA ligase | |||
| 144 | R | NgoJH8ORFBP (100% identity) | NgoJH9ORFDP | |
| 145 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoJH9ORFDP |
| 146 | GTPase Obg | |||
| 144 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoJH9ORFLP |
| 145 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoJH9ORFLP |
| 146 | 59 aa hypothetical protein | |||
| 114 | Ribosome-recycling factor | |||
| 119 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.NgoJH9ORFFP |
| 122 | R | NgoPII restriction endonuclease | NgoJH9ORFFP | |
| 126 | 97 aa hypothetical protein | |||
| 170 | 112 aa hypothetical protein | |||
| 171 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoJH9ORFMP | |
| 172 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoJH9ORFMP |
| 174 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoJH9ORFMP |
| 292 | Anthranilate synthase component 1 | |||
| 300 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoJH9ORFEP |
| 302 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoJH9ORFEP |
| 303 | N5-carboxyaminoimidazole ribonucleotide synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 41 | Uncharacterized protein | |||
| 42 | R | NgoNCORF1272P (87% identity) | NgoJH9ORFCP | |
| 44 | tRNA 2-thiocytidine biosynthesis protein TtcA | |||
| 46 | R | NgoWPIIP (100% identity) | CCACC | NgoJH9ORFGP |
| 51 | M | M.NgoSH240ORFNP (100% identity) | M.NgoJH9ORFGP | |
| 125 | 117 aa hypothetical protein | |||
| 126 | M | M.NgoFC428ORF645P (99% identity) | GCAGA | M.NgoJH9ORFRP |
| ??? | R | Type III restriction-modification system HindVIP enzyme res | GCAGA | NgoJH9ORFRP |