Ref: Mac Aogain,M. et al. unpublished

REBASE ref # 24516

Contig set: 2,079,908 bp

GenBank #: NAGP00000000 (NZ_NAGP00000000)

REBASE acronym: NgoJH11

Org_num: 24580

 

All begin ORF_

Type I
ORF Gene Most similar Specificity Name
 
1 S S1.NgoWPORF494P (100% identity) S.NgoJH11ORFOP
2 Uncharacterized protein
3 Damage-inducible protein D
4 104 aa hypothetical protein
5 117 aa hypothetical protein
??? M M.NgoJH7ORFLP (100% identity) M.NgoJH11ORFOP
13 Uncharacterized protein
 
24 89 aa hypothetical protein
25 M M.NgoWSI (100% identity) M.NgoJH11ORFFP
 
102 Uncharacterized protein
104 R NgoWSIIP (100% identity) NgoJH11ORFLP
110 Restriction endonuclease subunit S
 
104 Restriction endonuclease
110 S S2.NgoJH2ORFRP (100% identity) S.NgoJH11ORFMP
113 Restriction endonuclease EcoprrI subunit S
 
103 131 aa hypothetical protein
104 R NgoWPIP (100% identity) NgoJH11ORFBP
109 68 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
4 3-isopropylmalate dehydrogenase
??? R NgoWPORF778P (100% identity) GGNNCC NgoJH11ORFIP
13 M M.NmeMBW2ORFJP (100% identity) GGNNCC M.NgoJH11ORFIP
14 3-isopropylmalate dehydratase small subunit
 
5 86 aa hypothetical protein
??? M M.NgoJH7ORFGP (100% identity) M.NgoJH11ORFKP
??? R NgoTFGB2ORF1219P (100% identity) NgoJH11ORFKP
14 V V.Ngos1291ORF65P (100% identity) V.NgoJH11ORFKP
18 72 aa hypothetical protein
 
16 N5-carboxyaminoimidazole ribonucleotide synthase
20 R Ngos1291ORF10080P (100% identity) GCCGGC NgoJH11ORFEP
22 M M.Ngos1291ORF10080P (100% identity) GCCGGC M.NgoJH11ORFEP
23 Anthranilate synthase component 1
 
25 GTPase Obg
29 M M.Ngos1291ORF4640P (100% identity) RGCGCY M.NgoJH11ORFHP
30 R NgoJH9ORFDP (100% identity) NgoJH11ORFHP
31 Cysteine--tRNA ligase
 
34 Uncharacterized protein
35 M M1.NgoWSIII (100% identity) GGTGA M1.NgoJH11ORFTP
36 M M1.Ngos1291II (100% identity) GGTGA M2.NgoJH11ORFTP
37 R NgoWFIIP (100% identity) GGTGA NgoJH11ORFTP
38 105 aa hypothetical protein
 
43 Uncharacterized protein
??? R Ngos1291ORF5750P (100% identity) GATC NgoJH11ORFNP
??? M M.NgoWPORF8P (100% identity) M.NgoJH11ORFNP
52 Uncharacterized protein
 
42 Membrane protein
??? R NgoWSORF2276P (100% identity) GGCC NgoJH11ORFJP
50 M M.NgoJH7ORFNP (100% identity) GGCC M.NgoJH11ORFJP
53 Ribosome-recycling factor
 
103 Uncharacterized protein
105 M M.Ngos1291ORF260P (100% identity) CCGCGG M.NgoJH11ORFGP
107 R Ngos1291ORF260P (100% identity) CCGCGG NgoJH11ORFGP
110 UvrABC system protein A
 
186 Uncharacterized protein
187 M M.Ngos1291ORF7560P (100% identity) GCSGC M.NgoJH11ORFQP
189 R Ngos1291ORF7560P (100% identity) GCSGC NgoJH11ORFQP
190 H H.Ngos1291ORF7560P (100% identity) H.NgoJH11ORFQP
191 112 aa hypothetical protein
 
214 Chitinase
216 S S.NgoWSORF450P (100% identity) GACNNNNNTGA S.NgoJH11ORFRP
217 RM Ngos1291ORF7515P (100% identity) GACNNNNNTGA NgoJH11ORFRP
 
421 Phenylalanine--tRNA ligase beta subunit
425 R NgoWSORF391P (100% identity) NgoJH11ORFUP
??? M M.NgoWSORF391P (100% identity) M.NgoJH11ORFUP
431 V V.NgoWSORF391P (100% identity) V.NgoJH11ORFUP
433 Phenylalanine--tRNA ligase alpha subunit
Type III
ORF Gene Most similar Specificity Name
 
??? M M.NgoJH1ORFAP (59% identity) M.NgoJH11ORFDP
5 117 aa hypothetical protein
 
1 M M.NgoWFI (97% identity) CCACC M.NgoJH11ORFCP
6 R NgoWPIIP (100% identity) CCACC NgoJH11ORFCP
9 tRNA 2-thiocytidine biosynthesis protein TtcA
 
1 M M.NgoWSORF749P (38% identity) M.NgoJH11ORFSP
4 R Type III restriction-modification system HindVIP enzyme res NgoJH11ORFSP
 
4 Uncharacterized protein
5 R NgoWPORF742P (89% identity) NgoJH11ORFAP
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