Escherichia coli UMDKSU-2013-3-296D |
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Putative Escherichia coli UMDKSU-2013-3-296D RM systems
Ref: Noll,L.W. et al. unpublished
REBASE ref # 24468
Contig set: 5,155,000 bp
GenBank #: MVLG00000000 (NZ_MVLG00000000)
REBASE acronym: Eco3296D
Org_num: 24496
All begin ORF_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3 | 61 aa hypothetical protein | |||
| 4 | M | M.EcoYB141ORF15470P (100% identity) | M1.Eco3296DORFGP | |
| 6 | 101 aa hypothetical protein | |||
| 7 | Uncharacterized protein | |||
| 8 | Antitermination protein Q homolog of cryptic prophage CP-933M | |||
| 9 | 111 aa hypothetical protein | |||
| 10 | 124 aa hypothetical protein | |||
| 11 | 65 aa hypothetical protein | |||
| 12 | 66 aa hypothetical protein | |||
| 13 | Uncharacterized protein | |||
| 14 | Uncharacterized protein | |||
| 15 | 99 aa hypothetical protein | |||
| 16 | Uncharacterized protein | |||
| 17 | R | EcoR811ORFEP (100% identity) | Eco3296DORFGP | |
| 18 | M | M.EcoB1109aORFBP (100% identity) | GCCGGC | M2.Eco3296DORFGP |
| 21 | Uncharacterized protein | |||
| 27 | Inner membrane protein YhdU | |||
| 28 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco3296DORFAP |
| 30 | 98 aa hypothetical protein | |||
| 82 | Porin | |||
| 83 | M | M.Eco398BORFGP (100% identity) | M.Eco3296DORFHP | |
| 85 | 82 aa hypothetical protein | |||
| 97 | 60 aa hypothetical protein | |||
| 100 | M | M.Eco398BORFHP (100% identity) | GATC | M.Eco3296DORFIP |
| 104 | Uncharacterized protein | |||
| 119 | Protein ninE | |||
| 121 | M | M.Eco3134AORFAP (100% identity) | M.Eco3296DORFCP | |
| 153 | Uncharacterized protein | |||
| 154 | M | M.Eco3141EORFEP (100% identity) | M.Eco3296DORFDP | |
| 163 | Recombination-associated protein RdgC | |||
| 124 | Ribulose-phosphate 3-epimerase | |||
| 125 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3296DDamP |
| 128 | Cell division protein DamX | |||
| 1072 | Uncharacterized inner membrane transporter YedA | |||
| 1073 | V | V.Sdy49550DcmP (100% identity) | V.Eco3296DDcmP | |
| 1077 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.Eco3296DDcmP |
| 1079 | Metal-dependent phosphohydrolase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | uncharacterized protein | |||
| 4 | M | M.SflN97ORF8425P (100% identity) | GATC | M.Eco3296DORFFP |
| 7 | NinB protein | |||