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Putative Planktothricoides species SR001 RM systems
Ref: Tan,B. et al. unpublished
REBASE ref # 24430
Contig set: 7,056,742 bp
GenBank #: LIUQ00000000 (NZ_LIUQ00000000)
REBASE acronym: Psp001
Org_num: 24399
All begin AM228_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
20825 | 115 aa hypothetical protein | |||
20830 | R | Cra505ORF3301P (65% identity) | Psp001ORF20870P | |
20835 | 67 aa hypothetical protein | |||
20840 | 103 aa hypothetical protein | |||
20845 | 189 aa hypothetical protein | |||
20850 | 69 aa hypothetical protein | |||
20855 | 144 aa hypothetical protein | |||
20860 | 297 aa hypothetical protein | |||
20865 | S | S.Mmo22980ORF90P (47% identity) | S.Psp001ORF20870P | |
20870 | M | M.Cra505ORF3301P (78% identity) | M.Psp001ORF20870P | |
20875 | pseudogene | |||
18605 | 62 aa hypothetical protein | |||
18610 | M | M.Pag204ORF40580P (69% identity) | M.Psp001ORF18610P | |
18615 | S | 286 aa hypothetical protein | S.Psp001ORF18610P | |
18620 | 416 aa hypothetical protein | |||
21415 | 76 aa hypothetical protein | |||
21420 | R | Csp7425ORF3148P (70% identity) | Psp001ORF21440P | |
21425 | S | S.CspB1200ORF7770P (49% identity) | S.Psp001ORF21440P | |
21430 | FdxN element excision controlling factor | |||
21435 | pseudogene | |||
21440 | M | M.Pru82ORF5078P (77% identity) | M.Psp001ORF21440P | |
21445 | 75 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
27845 | M | M.Msp7113ORF6780P (28% identity) | M.Psp001ORF27845P | |
27850 | 80 aa hypothetical protein | |||
2410 | M | M.Msp7113ORF6065P (50% identity) | M.Psp001ORF2410P | |
2415 | lipid-A-disaccharide synthase | |||
23850 | RM | Sst15041ORFAP (69% identity) | Psp001ORF23850P | |
23855 | 388 aa hypothetical protein | |||
27705 | uncharacterized protein | |||
27710 | R | Nsp210ORF8015P (48% identity) | Psp001ORF27715P | |
27715 | M | M.Ski73ORF39570P (73% identity) | M.Psp001ORF27715P | |
27720 | 293 aa hypothetical protein | |||
14330 | cytochrome oxidase | |||
14335 | RM | Ocy1ORF2480P (60% identity) | Psp001ORF14335P | |
20535 | AAA+ family ATPase | |||
20540 | R | Ocy1ORF14765P (78% identity) | Psp001ORF20545P | |
20545 | M | M.Osp6506ORF3730015P (70% identity) | M.Psp001ORF20545P | |
20550 | 134 aa hypothetical protein | |||
26625 | ADP-heptose synthase | |||
26630 | M | M.PamM71ORF8915P (71% identity) | M1.Psp001ORF26630P | |
26635 | M | M.OspAP17ORF380P (64% identity) | M2.Psp001ORF26630P | |
26640 | 238 aa hypothetical protein | |||
13490 | 66 aa hypothetical protein | |||
13495 | M | M.Nsp870ORF19225P (60% identity) | M.Psp001ORF13495P | |
13500 | recombinase | |||
26750 | 229 aa hypothetical protein | |||
26755 | M | M.PspETS05ORFPP (67% identity) | M.Psp001ORF26755P | |
26760 | 109 aa hypothetical protein | |||
27060 | 1109 aa hypothetical protein | |||
27065 | RM | AplC1ORF61590P (85% identity) | Psp001ORF27065P | |
27070 | 62 aa hypothetical protein | |||
17025 | 151 aa hypothetical protein | |||
17030 | M | M.PspETS05ORFMP (66% identity) | M.Psp001ORF17030P | |
17035 | glycosyl hydrolase family 15 | |||
23505 | pseudogene | |||
23510 | M | M.Sxi21ORF11890P (66% identity) | M.Psp001ORF23510P | |
23515 | R | NbaLBB01ORF10155P (62% identity) | Psp001ORF23510P | |
23520 | glycine dehydrogenase | |||
15550 | pseudogene | |||
15555 | RM | Pte9214ORF4969P (58% identity) | Psp001ORF15555P | |
15560 | 85 aa hypothetical protein | |||
14365 | phospho-2-dehydro-3-deoxyheptonate aldolase | |||
14370 | RM | Asp43ORFIP (65% identity) | Psp001ORF14370P | |
14375 | pseudogene | |||
21400 | hydrogenase expression protein HypA | |||
21405 | M | M.Pru82ORF4293P (70% identity) | M.Psp001ORF21405P | |
21410 | pseudogene | |||
13570 | helicase | |||
13575 | M | M.Mva003ORF27360P (78% identity) | M.Psp001ORF13575P | |
13580 | 141 aa hypothetical protein | |||
6220 | DNA polymerase I | |||
6225 | M | M.Pte9214ORF3348P (89% identity) | M.Psp001ORF6225P | |
6230 | R | PagC7805ORFAP (49% identity) | Psp001ORF6225P | |
6235 | pseudogene | |||
15605 | 426 aa hypothetical protein | |||
15610 | M | M.Nsp9414ORF40730P (81% identity) | M.Psp001ORF15610P | |
15615 | 215 aa hypothetical protein | |||
7585 | 767 aa hypothetical protein | |||
7590 | M | M.Oac6304ORF1315P (76% identity) | M.Psp001ORF7590P | |
7595 | R | Oac6304ORF1315P (79% identity) | Psp001ORF7590P | |
7600 | HNH endonuclease | |||
22075 | 62 aa hypothetical protein | |||
22080 | M | M.Asp9108ORF14670P (60% identity) | M.Psp001ORF22080P | |
22085 | arginine biosynthesis protein ArgJ | |||
20395 | 139 aa hypothetical protein | |||
20400 | M | M.Tte7101ORF10480P (68% identity) | M.Psp001ORF20400P | |
20405 | R | Csp7822ORF5525P (60% identity) | Psp001ORF20400P | |
20410 | C | C.Csp7822ORF5525P (73% identity) | C.Psp001ORF20400P | |
20415 | 192 aa hypothetical protein | |||
15315 | Light-independent protochlorophyllide reductase | |||
15320 | M | M.Oac6304ORF2383P (64% identity) | M.Psp001ORF15320P | |
15325 | pseudogene | |||
23095 | 122 aa hypothetical protein | |||
23100 | RM | Ssp6312ORF3349P (41% identity) | Psp001ORF23100P | |
8155 | 63 aa hypothetical protein | |||
8160 | M | M.Ael3563ORF15550P (67% identity) | M.Psp001ORF8160P | |
8165 | pseudogene | |||
17505 | GTP-binding protein TypA | |||
17510 | M | M.NspIII (75% identity) | M.Psp001ORF17510P | |
17515 | R | Nsp0702ORF6235P (82% identity) | Psp001ORF17510P | |
17520 | pseudogene | |||
8175 | 180 aa hypothetical protein | |||
8180 | M | M.PspETS05ORFEP (65% identity) | M.Psp001ORF8180P | |
8185 | pseudogene | |||
17815 | 345 aa hypothetical protein | |||
17820 | M | M.LpnPORF1236P (48% identity) | M.Psp001ORF17820P | |
17825 | 72 aa hypothetical protein | |||
19940 | 371 aa hypothetical protein | |||
19945 | M | M.Pte9214DndCP (68% identity) | M.Psp001DndCP | |
19950 | DNA sulfur modification protein DndD | |||
19945 | sulfurtransferase DndC | |||
19950 | M | M.PamM71DndDP (58% identity) | M.Psp001DndDP | |
19955 | thiamine biosynthesis protein ThiF | |||
12725 | fatty-acid oxidation protein subunit alpha | |||
12730 | RM | Pps713ORF3245P (62% identity) | Psp001ORF12730P | |
12735 | phycocyanin | |||
8255 | transcriptional regulator | |||
8260 | R | CspESFC1ORFJP (86% identity) | Psp001ORF8265P | |
8265 | M | M.CspESFC1ORFJP (88% identity) | M.Psp001ORF8265P | |
8270 | 776 aa hypothetical protein | |||
13225 | 191 aa hypothetical protein | |||
13230 | M | M.PspETS05ORFRP (63% identity) | M.Psp001ORF13230P | |
13235 | 160 aa hypothetical protein | |||
8270 | 776 aa hypothetical protein | |||
8275 | M | M.GspPL17ORF18930P (49% identity) | M.Psp001ORF8275P | |
8280 | orotate phosphoribosyltransferase | |||
16070 | folate-biopterin transporter | |||
16075 | M | M.Csp7716ORF94390P (59% identity) | M.Psp001ORF16075P | |
16080 | pseudogene | |||
17605 | 636 aa hypothetical protein | |||
17610 | R | Csp7424ORF5156P (88% identity) | Psp001ORF17615P | |
17615 | M | M.Asp9108ORF5000P (69% identity) | M.Psp001ORF17615P | |
17620 | 1284 aa hypothetical protein | |||
13300 | glycerol acyltransferase | |||
13305 | M | M.PspETS05ORFQP (83% identity) | M.Psp001ORF13305P | |
13310 | 70 aa hypothetical protein | |||
16130 | GTP-binding protein | |||
16135 | R | Ppa514ORF3468P (48% identity) | Psp001ORF16140P | |
16140 | M | M.Mme286ORFK1P (51% identity) | M.Psp001ORF16140P | |
16145 | DNA polymerase III | |||
13350 | pseudogene | |||
13355 | RM | Mae4ORF9590P (66% identity) | Psp001ORF13355P | |
13360 | pseudogene | |||
12885 | 2-dehydropantoate 2-reductase | |||
12890 | M | M.PamM71ORF10580P (67% identity) | M.Psp001ORF12890P | |
12895 | 101 aa hypothetical protein | |||
1665 | dihydrodipicolinate reductase | |||
1670 | M | M.Nsp4103DndEP (72% identity) | M.Psp001DndEP | |
1675 | glutamate dehydrogenase | |||
14300 | peptidoglycan-binding protein | |||
14305 | M | M.Psp001ORF13575P (51% identity) | M.Psp001ORF14305P | |
8480 | ribulose 1,5-bisphosphate carboxylase small | |||
8485 | R | PspETS05ORFJP (55% identity) | Psp001ORF8490P | |
8490 | M | M.Oac6304ORF5673P (66% identity) | M.Psp001ORF8490P | |
8500 | metallophosphoesterase | |||
9075 | cysteine desulfurase | |||
9080 | M | M.Pru82ORF1097P (61% identity) | M.Psp001ORF9080P | |
9085 | restriction endonuclease | |||
9080 | DNA methylase | |||
9085 | R | Pte9214ORF2023P (60% identity) | Psp001ORF9085P | |
9090 | 245 aa hypothetical protein | |||
1885 | histidine kinase | |||
1890 | RM | Psp001ORF1920P (66% identity) | Psp001ORF1890BP | |
1895 | 80 aa hypothetical protein | |||
1900 | 69 aa hypothetical protein | |||
1905 | twitching motility protein PilT | |||
1910 | 106 aa hypothetical protein | |||
1915 | RM | Pmu1806ORFRAP (79% identity) | Psp001ORF1890AP | |
1920 | 413 aa hypothetical protein | |||
540 | 97 aa hypothetical protein | |||
545 | M | M.MspMC19ORF2545P (68% identity) | M.Psp001ORF545P | |
550 | GxxExxY protein | |||
1915 | N-6 DNA Methylase family | |||
1920 | RM | Nsp0039ORFJP (22% identity) | Psp001ORF1920P | |
1925 | 187 aa hypothetical protein | |||
5140 | pseudogene | |||
5145 | M | M.Fsp4106ORF29590P (78% identity) | M.Psp001ORF5145P | |
5150 | prolyl aminopeptidase | |||
4415 | virulence factor | |||
4420 | RM | Ael3563ORF10920P (63% identity) | Psp001ORF4420P | |
4425 | 218 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
18590 | 147 aa hypothetical protein | |||
18595 | R | Ssp7003McrBP (27% identity) | Psp001McrBP | |
18600 | R | MprJHBMcrCP (45% identity) | Psp001McrCP | |
18605 | 62 aa hypothetical protein |