Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO STM2896::STM1252 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO STM2896::STM1252 RM systems
Ref: Arabyan,N. et al. unpublished
REBASE ref # 24077
Contig set: 4,892,266 bp
GenBank #: MWQR00000000 (NZ_MWQR00000000)
REBASE acronym: Sen1252
Org_num: 24178
All begin B4O68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12725 | 110 aa hypothetical protein | |||
| 12730 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen1252ORF12735P |
| 12735 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen1252ORF12735P |
| 12740 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen1252ORF12735P |
| 12745 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17345 | ribulose-phosphate 3-epimerase | |||
| 17350 | M | DNA adenine methylase | GATC | M.Sen1252DamP |
| 17355 | SPOR domain-containing protein | |||
| 13550 | amino acid exporter | |||
| 13555 | V | very short patch repair endonuclease | V.Sen1252DcmP | |
| 13560 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen1252DcmP |
| 13565 | phosphohydrolase | |||
| 17280 | Fis family transcriptional regulator | |||
| 17285 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen1252ORF17285P |
| 17290 | DUF2556 domain-containing protein | |||
| 11385 | 0 aa hypothetical protein | |||
| 11390 | M | M.StyUK1ORFAP (100% identity) | M.Sen1252ORF11390P | |
| 11395 | 73 aa hypothetical protein | |||
| 12555 | 363 aa hypothetical protein | |||
| 12560 | RM | StyUK1IV (100% identity) | GATCAG | Sen1252ORF12560P |
| 12565 | DNA repair protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2035 | 33 aa hypothetical protein | |||
| 2040 | R | StyUK1IP (99% identity) | CAGAG | Sen1252ORF2045P |
| 2045 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen1252ORF2045P |
| 2050 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12740 | type I restriction-modification system | |||
| 12745 | R | StyUK1MrrP (100% identity) | Sen1252Mrr2P | |
| 12750 | 95 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11605 | replication endonuclease from prophage-like | |||
| 11610 | M | M.StyLTORF13745P (100% identity) | M.Sen1252ORF11610P | |
| 11615 | 75 aa hypothetical protein | |||