Salmonella enterica subsp. enterica serovar Indiana D90 |
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Putative Salmonella enterica subsp. enterica serovar Indiana D90 RM systems
Ref: Bai,L. Vet. Microbiol. (2017) In press
REBASE ref # 24915
| Sequence length: | GenBank #: | |
| Chromosome: | 4,779,514 bp | CP022450 |
| plasmid pD90-1: | 222,470 bp | CP022451 |
REBASE acronym: SenD90
Org_num: 25369
All begin CGL53_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1805 | cell division protein DamX | |||
| 1810 | M | M.StyTDamP (100% identity) | GATC | M.SenD90DamP |
| 1815 | ribulose-phosphate 3-epimerase | |||
| 2320 | DUF2556 domain-containing protein | |||
| 2325 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.SenD90ORF2325P |
| 2330 | Fis family transcriptional regulator | |||
| 3290 | DUF3850 domain-containing protein | |||
| 3295 | M | M.SspZ54ORF6040P (100% identity) | M.SenD90ORF3295P | |
| 3300 | replication endonuclease | |||
| 9935 | phosphohydrolase | |||
| 9940 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenD90DcmP |
| 9945 | V | V.Sensp14178DcmP (100% identity) | V.SenD90DcmP | |
| 9950 | drug/metabolite exporter YedA | |||
| 18770 | cruciferin | |||
| 18775 | M | M.Sensp14152ORF18590P (100% identity) | M.SenD90ORF18775P | |
| 18780 | 74 aa hypothetical protein | |||
| plasmid pD90-1 | ||||
| 24945 | 108 aa hypothetical protein | |||
| 24950 | M | M.YpsF1ORFBP (100% identity) | M.SenD90ORF24950P | |
| 24955 | 202 aa hypothetical protein | |||
| 25060 | DNA-binding protein | |||
| 25065 | M | M.YpsF1ORFDP (100% identity) | M.SenD90ORF25065P | |
| 25070 | 284 aa hypothetical protein | |||
| 25635 | 55 aa hypothetical protein | |||
| 25640 | M | M.YpsF1ORFCP (100% identity) | M.SenD90ORF25640P | |
| 24345 | nuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18335 | 33 aa hypothetical protein | |||
| 18340 | R | Sensp14154ORF17330P (100% identity) | CAGAG | SenD90ORF18345P |
| 18345 | M | M.Sensp14178ORF17290P (100% identity) | CAGAG | M.SenD90ORF18345P |
| 18350 | MFS transporter | |||
| 21160 | peptidase S8 | |||
| 21165 | M | M.Sensp14178ORF19930P (100% identity) | M.SenD90ORF21165P | |
| 21170 | R | Sensp14178ORF19930P (100% identity) | SenD90ORF21165P | |
| 21175 | integrase | |||