Ref: Stenmark,B. et al. unpublished

REBASE ref # 21229

Complete sequence: 2,166,707 bp

GenBank #: CP021516

REBASE acronym: Nme563

Org_num: 23066

 

All begin CCD90_

Type I
ORF Gene Most similar Specificity Name
 
2745 ADP-L-glycero-D-mannoheptose-6-epimerase
2750 M M.Nme98ORF2765P (100% identity) M.Nme563ORF2750P
2755 cell filamentation protein Fic
2760 S S.NmeAORF1038P (72% identity) S1.Nme563ORF2750P
2765 IS1595 family transposase ISNme3
2770 S S3.Nme98ORF2765P (100% identity) S2.Nme563ORF2750P
2775 R Nme98ORF2765P (100% identity) Nme563ORF2750P
2780 ATP-dependent Clp protease ATP-binding subunit
 
4830 ABC transporter
4835 M M.Nme98I (100% identity) M.Nme563ORF4835P
4840 S 80 aa hypothetical protein S1.Nme563ORF4835P
4845 IS1595 family transposase ISNme3
4850 S S.Nme98I (77% identity) S2.Nme563ORF4835P
4855 R Nme98IP (100% identity) Nme563ORF4835P
4860 AAA family ATPase
Type II
ORF Gene Most similar Specificity Name
 
45 IS5 family transposase
50 M M1.Nme98ORF45P (100% identity) GATC M1.Nme563ORF50P
55 M M2.Nme98ORF45P (100% identity) GATC M2.Nme563ORF50P
60 184 aa hypothetical protein
 
2730 D-glycero-beta-D-manno-heptose-7-phosphate
2735 M M.NmeW135ORF855P (100% identity) CCAGA M.Nme563ORF2735P
??? R Nme98ORF2750P (100% identity) CCAGA Nme563ORF2735P
2745 ADP-L-glycero-D-mannoheptose-6-epimerase
 
3415 transposase
3420 M M.Nme98ORF3460P (100% identity) M.Nme563ORF3420P
3425 HNH endonuclease
 
4945 3-isopropylmalate dehydratase small subunit
4950 M M.NmeMC58ORF1033P (100% identity) GGNNCC M.Nme563ORF4950P
4955 R Nme95IIP (100% identity) GGNNCC Nme563ORF4950P
4960 3-isopropylmalate dehydrogenase
 
5160 ribonucleotide-diphosphate reductase subunit
5165 R NmeMC58ORF1290P (100% identity) Nme563ORF5170P
5170 M M.Nme98ORF5200P (100% identity) CCWGG M.Nme563ORF5170P
5175 ribonucleoside-diphosphate reductase subunit
 
7005 243 aa hypothetical protein
7010 RM Nme98ORF7020AP (100% identity) Nme563ORF7010AP
7015 RM Nme98ORF7020BP (100% identity) Nme563ORF7010BP
7020 pilS cassette
 
10410 RNA-binding transcriptional accessory protein
10415 M M1.NmeMC58ORF76P (100% identity) GGTGA M1.Nme563ORF10415P
10420 M M.NmeST254ORF61P (100% identity) M2.Nme563ORF10415P
10425 UDP-glucose 4-epimerase GalE
Type III
ORF Gene Most similar Specificity Name
 
5660 tRNA pseudouridine(55) synthase TruB
5665 M M.Nme25073ORF1030P (95% identity) M.Nme563ORF5665P
5670 R Nme98ORF5695P (100% identity) Nme563ORF5665P
5675 alpha-hydroxy-acid oxidizing enzyme
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