|
Putative Neisseria meningitidis 14-563 RM systems
Ref: Stenmark,B. et al. unpublished
REBASE ref # 21229
Complete sequence: 2,166,707 bp
GenBank #: CP021516
REBASE acronym: Nme563
Org_num: 23066
All begin CCD90_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2745 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
2750 | M | M.Nme98ORF2765P (100% identity) | M.Nme563ORF2750P | |
2755 | cell filamentation protein Fic | |||
2760 | S | S.NmeAORF1038P (72% identity) | S1.Nme563ORF2750P | |
2765 | IS1595 family transposase ISNme3 | |||
2770 | S | S3.Nme98ORF2765P (100% identity) | S2.Nme563ORF2750P | |
2775 | R | Nme98ORF2765P (100% identity) | Nme563ORF2750P | |
2780 | ATP-dependent Clp protease ATP-binding subunit | |||
4830 | ABC transporter | |||
4835 | M | M.Nme98I (100% identity) | M.Nme563ORF4835P | |
4840 | S | 80 aa hypothetical protein | S1.Nme563ORF4835P | |
4845 | IS1595 family transposase ISNme3 | |||
4850 | S | S.Nme98I (77% identity) | S2.Nme563ORF4835P | |
4855 | R | Nme98IP (100% identity) | Nme563ORF4835P | |
4860 | AAA family ATPase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
45 | IS5 family transposase | |||
50 | M | M1.Nme98ORF45P (100% identity) | GATC | M1.Nme563ORF50P |
55 | M | M2.Nme98ORF45P (100% identity) | GATC | M2.Nme563ORF50P |
60 | 184 aa hypothetical protein | |||
2730 | D-glycero-beta-D-manno-heptose-7-phosphate | |||
2735 | M | M.NmeW135ORF855P (100% identity) | CCAGA | M.Nme563ORF2735P |
??? | R | Nme98ORF2750P (100% identity) | CCAGA | Nme563ORF2735P |
2745 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
3415 | transposase | |||
3420 | M | M.Nme98ORF3460P (100% identity) | M.Nme563ORF3420P | |
3425 | HNH endonuclease | |||
4945 | 3-isopropylmalate dehydratase small subunit | |||
4950 | M | M.NmeMC58ORF1033P (100% identity) | GGNNCC | M.Nme563ORF4950P |
4955 | R | Nme95IIP (100% identity) | GGNNCC | Nme563ORF4950P |
4960 | 3-isopropylmalate dehydrogenase | |||
5160 | ribonucleotide-diphosphate reductase subunit | |||
5165 | R | NmeMC58ORF1290P (100% identity) | Nme563ORF5170P | |
5170 | M | M.Nme98ORF5200P (100% identity) | CCWGG | M.Nme563ORF5170P |
5175 | ribonucleoside-diphosphate reductase subunit | |||
7005 | 243 aa hypothetical protein | |||
7010 | RM | Nme98ORF7020AP (100% identity) | Nme563ORF7010AP | |
7015 | RM | Nme98ORF7020BP (100% identity) | Nme563ORF7010BP | |
7020 | pilS cassette | |||
10410 | RNA-binding transcriptional accessory protein | |||
10415 | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M1.Nme563ORF10415P |
10420 | M | M.NmeST254ORF61P (100% identity) | M2.Nme563ORF10415P | |
10425 | UDP-glucose 4-epimerase GalE | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
5660 | tRNA pseudouridine(55) synthase TruB | |||
5665 | M | M.Nme25073ORF1030P (95% identity) | M.Nme563ORF5665P | |
5670 | R | Nme98ORF5695P (100% identity) | Nme563ORF5665P | |
5675 | alpha-hydroxy-acid oxidizing enzyme |