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Putative Salmonella enterica subsp. enterica serovar Typhimurium 14028S RM systems
Ref: Jarvik,T. et al. J. Bacteriol. 192 (2), 560-567 (2010)
REBASE ref # 11344
Sequence length: | GenBank #: | |
Chromosome: | 4,870,265 bp | CP001363 |
plasmid unnamed: | 93,832 bp | CP001362 |
REBASE acronym: SenT1
Org_num: 5627
All begin STM14_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5435 | 43 aa hypothetical protein | |||
5436 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenT1ORF5437P |
5437 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenT1ORF5437P |
5438 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenT1ORF5437P |
5439 | restriction endonuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1434 | Ead-like protein | |||
1435 | M | M.Sens29958ORF6205P (100% identity) | M.SenT1ORF1435P | |
1436 | Eaa-like protein | |||
2412 | 306 aa hypothetical protein | |||
2413 | V | V.StyUK1DcmP (100% identity) | V.SenT1DcmP | |
2414 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenT1DcmP |
2415 | 231 aa hypothetical protein | |||
4083 | DNA-binding protein Fis | |||
4084 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenT1ORF4084P |
4085 | periplasmic protein | |||
4195 | ribulose-phosphate 3-epimerase | |||
4196 | M | M.StyTDamP (100% identity) | GATC | M.SenT1DamP |
4197 | 425 aa hypothetical protein | |||
5391 | ABC-type sugar/spermidine/putrescine | |||
5392 | RM | StyUK1IV (100% identity) | GATCAG | SenT1ORF5392P |
5393 | DNA repair ATPase | |||
plasmid unnamed | ||||
5580 | cytoplasmic protein | |||
5581 | M | M.StyUK1ORFAP (100% identity) | M.SenT1ORF5581P | |
5582 | cytoplasmic protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
416 | inner membrane protein | |||
417 | M | M.StyUK1I (100% identity) | CAGAG | M.SenT1ORF417P |
418 | R | StyUK1IP (100% identity) | CAGAG | SenT1ORF417P |
419 | 44 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5438 | type I restriction enzyme EcoKI subunit R | |||
5439 | R | StyUK1MrrP (100% identity) | SenT1MrrP | |
5440 | 45 aa hypothetical protein | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2466 | crossover junction protein | |||
2467 | M | M.StyUK1V (100% identity) | GATC | M.SenT1ORF2467P |
2468 | transcriptional activator |