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Putative Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 RM systems
Ref: Kingsley,R.A. et al. Genome Res. 19 (12), 2279-2287 (2009)
REBASE ref # 11318
Sequence length: | GenBank #: | |
Chromosome: | 4,879,400 bp | FN424405 |
plasmid pSLT-BT: | 117,047 bp | FN432031 (NC_013437) |
REBASE acronym: Sen23580
Org_num: 5648
All begin SLT-BT, STMMW_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
44691 | endoribonuclease | |||
44701 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen23580ORF44711P |
44711 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen23580ORF44711P |
44721 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen23580ORF44711P |
44731 | mrr restriction system protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19691 | membrane protein | |||
19701 | V | V.StyUK1DcmP (100% identity) | V.Sen23580DcmP | |
19711 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen23580DcmP |
19721 | 231 aa conserved hypothetical protein | |||
20181 | crossover junction endodeoxyribonuclease rusa | |||
20191 | M | M.StyUK1V (100% identity) | GATC | M.Sen23580ORF20191P |
20201 | predicted phage protein | |||
33831 | Fis DNA-binding protein | |||
33841 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen23580ORF33841P |
33851 | exported protein | |||
34731 | ribulose-phosphate 3-epimerase | |||
34741 | M | DNA adenine methylase | GATC | M.Sen23580DamP |
34751 | DamX protein | |||
44391 | ABC-type sugar/spermidine/putrescine | |||
44401 | RM | StyUK1IV (100% identity) | GATCAG | Sen23580ORF44401P |
44411 | ATPase | |||
plasmid pSLT-BT | ||||
661 | 95 aa hypothetical protein | |||
671 | M | M.StyUK1ORFAP (100% identity) | M.Sen23580ORF70P | |
672 | 137 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4261 | metabolite transport protein | |||
4271 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen23580ORF4271P |
4281 | R | StyUK1IP (99% identity) | CAGAG | Sen23580ORF4271P |
4291 | 33 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
44721 | type III restriction enzyme | |||
44731 | R | StyUK1MrrP (100% identity) | Sen23580MrrP | |
44741 | 95 aa hypothetical protein |