Neisseria meningitidis 95-134 |
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Putative Neisseria meningitidis 95-134 RM systems
Ref: Stenmark,B. et al. unpublished
REBASE ref # 21229
Complete sequence: 2,165,984 bp
GenBank #: CP021725
REBASE acronym: Nme95
Org_num: 17961
All begin CCD80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2755 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 2760 | M | M.Nme98ORF2765P (100% identity) | M.Nme95ORF2760P | |
| 2765 | cell filamentation protein Fic | |||
| 2770 | S | S.NmeAORF1038P (48% identity) | S1.Nme95ORF2760P | |
| 2775 | S | type I restriction endonuclease subunit S | S2.Nme95ORF2760P | |
| 2780 | IS1595 family transposase ISNme3 | |||
| 2785 | S | S3.Nme98ORF2765P (100% identity) | S3.Nme95ORF2760P | |
| 2790 | R | Nme98ORF2765P (100% identity) | Nme95ORF2760P | |
| 2795 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4850 | ABC transporter | |||
| 4855 | M | M.Nme98I (100% identity) | CACNNNNNTAC | M.Nme95I |
| 4860 | S | S.Nme98I (100% identity) | CACNNNNNTAC | S.Nme95I |
| 4865 | R | Nme98IP (100% identity) | CACNNNNNTAC | Nme95IP |
| 4870 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 40 | leucine--tRNA ligase | |||
| 45 | M | M1.Nme98ORF45P (100% identity) | GATC | M1.Nme95ORF45P |
| 50 | M | M2.Nme98ORF45P (100% identity) | GATC | M2.Nme95ORF45P |
| 55 | 184 aa hypothetical protein | |||
| 2740 | D-glycero-beta-D-manno-heptose-7-phosphate | |||
| 2745 | M | M.NmeW135ORF855P (100% identity) | CCWGG | M.Nme95IV |
| ??? | type II restriction endonuclease | |||
| 2745 | DNA (cytosine-5-)-methyltransferase | |||
| ??? | R | Nme98ORF2750P (100% identity) | CCAGA | Nme95ORF2745P |
| 2755 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 3440 | transposase | |||
| 3445 | M | M.Nme98ORF3460P (100% identity) | GCRYGC | M.Nme95III |
| 3450 | HNH endonuclease | |||
| 4955 | 3-isopropylmalate dehydratase small subunit | |||
| 4960 | M | M.NmeMC58ORF1033P (100% identity) | GGNNCC | M.Nme95II |
| 4965 | R | Nme8249ORF1239P (100% identity) | GGNNCC | Nme95IIP |
| 4970 | 3-isopropylmalate dehydrogenase | |||
| 5170 | ribonucleotide-diphosphate reductase subunit | |||
| 5175 | R | NmeMC58ORF1290P (100% identity) | CCWGG | Nme95ORF5180P |
| 5180 | DNA (cytosine-5-)-methyltransferase | |||
| 5175 | type II restriction enzyme | |||
| 5180 | M | M.Nme98ORF5200P (100% identity) | CCWGG | M.Nme95V |
| 5185 | ribonucleoside-diphosphate reductase subunit | |||
| 7000 | 243 aa hypothetical protein | |||
| 7005 | RM | Nme98ORF7020AP (100% identity) | Nme95ORF7005AP | |
| 7010 | RM | Nme98ORF7020BP (100% identity) | Nme95ORF7005BP | |
| 7015 | 78 aa hypothetical protein | |||
| 10445 | RNA-binding transcriptional accessory protein | |||
| 10450 | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M1.Nme95ORF10450P |
| 10455 | M | M.NmeST254ORF61P (100% identity) | M2.Nme95ORF10450P | |
| 10460 | UDP-glucose 4-epimerase GalE | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5670 | tRNA pseudouridine(55) synthase TruB | |||
| 5675 | M | M.Nme98ORF5695P (100% identity) | M.Nme95ORF5675P | |
| 5680 | R | Nme98ORF5695P (100% identity) | Nme95ORF5675P | |
| 5685 | alpha-hydroxy-acid oxidizing enzyme | |||