Neisseria meningitidis 12-330 |
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Putative Neisseria meningitidis 12-330 RM systems
Ref: Stenmark,B. et al. unpublished
REBASE ref # 21229
Complete sequence: 2,169,717 bp
GenBank #: CP021724
REBASE acronym: Nme12330
Org_num: 18030
All begin CCD88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2730 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 2735 | M | M.Nme98ORF2765P (100% identity) | M.Nme12330ORF2735P | |
| 2740 | cell filamentation protein Fic | |||
| 2745 | S | S.NmeAORF1038P (48% identity) | S1.Nme12330ORF2735P | |
| 2750 | S | type I restriction endonuclease subunit S | S2.Nme12330ORF2735P | |
| 2755 | IS1595 family transposase ISNme3 | |||
| 2760 | S | S3.Nme98ORF2765P (100% identity) | S3.Nme12330ORF2735P | |
| 2765 | R | Nme98ORF2765P (100% identity) | Nme12330ORF2735P | |
| 2770 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4820 | ABC transporter | |||
| 4825 | M | M.Nme98I (100% identity) | M.Nme12330ORF4825P | |
| 4830 | 84 aa hypothetical protein | |||
| 4835 | IS1595 family transposase ISNme3 | |||
| 4840 | type I restriction endonuclease subunit S | |||
| 4845 | R | Nme98IP (100% identity) | Nme12330ORF4825P | |
| 4850 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | IS5 family transposase | |||
| 50 | M | M1.Nme98ORF45P (100% identity) | M1.Nme12330ORF50P | |
| 55 | M | M2.Nme98ORF45P (100% identity) | GATC | M2.Nme12330ORF50P |
| 60 | 184 aa hypothetical protein | |||
| 2715 | D-glycero-beta-D-manno-heptose-7-phosphate | |||
| 2720 | M | M.NmeW135ORF855P (100% identity) | CCAGA | M.Nme12330ORF2720P |
| ??? | R | Nme98ORF2750P (100% identity) | Nme12330ORF2720P | |
| 2730 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 3405 | transposase | |||
| 3410 | M | M.Nme98ORF3460P (100% identity) | ACCTGC | M.Nme12330ORF3410P |
| 3415 | HNH endonuclease | |||
| 4935 | 3-isopropylmalate dehydratase small subunit | |||
| 4940 | M | M.NmeMC58ORF1033P (100% identity) | GGNNCC | M.Nme12330ORF4940P |
| 4945 | R | Nme95IIP (100% identity) | GGNNCC | Nme12330ORF4940P |
| 4950 | 3-isopropylmalate dehydrogenase | |||
| 5150 | ribonucleotide-diphosphate reductase subunit | |||
| 5155 | R | NmeMC58ORF1290P (100% identity) | CCWGG | Nme12330ORF5160P |
| 5160 | M | M.Nme98ORF5200P (100% identity) | CCWGG | M.Nme12330ORF5160P |
| 5165 | ribonucleoside-diphosphate reductase subunit | |||
| 6970 | 243 aa hypothetical protein | |||
| 6975 | RM | Nme98ORF7020AP (100% identity) | Nme12330ORF6975AP | |
| 6980 | RM | Nme98ORF7020BP (100% identity) | Nme12330ORF6975BP | |
| 6985 | pilS cassette | |||
| 10385 | RNA-binding transcriptional accessory protein | |||
| 10390 | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M1.Nme12330ORF10395P |
| 10395 | M | Rieske (2Fe-2S) protein | M2.Nme12330ORF10395P | |
| 10400 | UDP-glucose 4-epimerase GalE | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5650 | tRNA pseudouridine(55) synthase TruB | |||
| 5655 | M | M.Nme91543ORF10995P (98% identity) | M.Nme12330ORF5655P | |
| 5660 | R | Nme98ORF5695P (100% identity) | Nme12330ORF5655P | |
| 5665 | alpha-hydroxy-acid oxidizing enzyme | |||