Ref: Stenmark,B. et al. unpublished

REBASE ref # 21229

Complete sequence: 2,167,947 bp

GenBank #: CP021517

REBASE acronym: Nme12

Org_num: 17944

 

All begin CCD87_

Type I
ORF Gene Most similar Specificity Name
 
2750 ADP-glyceromanno-heptose 6-epimerase
2755 M M.Nme98ORF2765P (100% identity) M.Nme12ORF2755P
2760 virulence RhuM family protein
2765 S S.NmeAORF1038P (48% identity) S1.Nme12ORF2755P
2770 S restriction endonuclease subunit S S2.Nme12ORF2755P
2775 IS1595-like element ISNme3 family transposase
2780 S S3.Nme98ORF2765P (100% identity) S3.Nme12ORF2755P
2785 R Nme98ORF2765P (100% identity) Nme12ORF2755P
2790 ATP-dependent Clp protease ATP-binding subunit
 
2740 cell filamentation protein Fic
2745 S S.NmeAORF1038P (48% identity) S1.Nme12ORF2735P
2750 S type I restriction endonuclease subunit S S2.Nme12ORF2735P
2755 IS1595 family transposase ISNme3
2760 S S3.Nme98ORF2765P (100% identity) S3.Nme12ORF2735P
2765 R Nme98ORF2765P (100% identity) Nme12ORF2735P
2770 ATP-dependent Clp protease ATP-binding subunit
 
4845 ABC transporter
4850 M M.Nme98I (100% identity) M.Nme12ORF4850P
4855 S restriction endonuclease subunit S S1.Nme12ORF4850P
4860 IS1595-like element ISNme3 family transposase
4865 S S.Nme98I (77% identity) S2.Nme12ORF4850P
4870 R Nme98IP (100% identity) Nme12ORF4850P
4875 replication-associated recombination protein A
 
4860 IS1595-like element ISNme3 family transposase
4865 S S.Nme98I (77% identity) S.Nme12ORF4825P
4870 type I restriction endonuclease subunit R
Type II
ORF Gene Most similar Specificity Name
 
50 IS5 family transposase
55 M M1.Nme98ORF45P (100% identity) GATC M1.Nme12ORF55P
60 M M2.Nme98ORF45P (100% identity) GATC M2.Nme12ORF55P
65 184 aa hypothetical protein
 
2735 D-glycero-beta-D-manno-heptose-7-phosphate
2740 M M.NmeW135ORF855P (100% identity) CCAGA M.Nme12ORF2740P
2745 R Nme98ORF2750P (98% identity) CCAGA Nme12ORF2740P
2750 ADP-glyceromanno-heptose 6-epimerase
 
3420 transposase
3425 M M.Nme98ORF3460P (100% identity) M.Nme12ORF3425P
3430 HNH endonuclease
 
4965 3-isopropylmalate dehydratase small subunit
4970 M M.NmeMC58ORF1033P (100% identity) GGNNCC M.Nme12ORF4970P
4975 R Nme95IIP (100% identity) GGNNCC Nme12ORF4970P
4980 3-isopropylmalate dehydrogenase
 
5185 ribonucleotide-diphosphate reductase subunit
5190 R NmeMC58ORF1290P (100% identity) Nme12ORF5195P
5195 M M.Nme98ORF5200P (100% identity) M.Nme12ORF5195P
5200 ribonucleoside-diphosphate reductase subunit
 
6955 243 aa hypothetical protein
6960 RM Nme98ORF7020AP (100% identity) Nme12ORF6960AP
6965 RM Nme98ORF7020BP (97% identity) Nme12ORF6960BP
6970 128 aa hypothetical protein
 
10275 RNA-binding transcriptional accessory protein
10280 M M1.NmeMC58ORF76P (100% identity) M1.Nme12ORF10280P
10285 M Rieske (2Fe-2S) protein M2.Nme12ORF10280P
10290 UDP-glucose 4-epimerase GalE
Type III
ORF Gene Most similar Specificity Name
 
5660 tRNA pseudouridine(55) synthase TruB
5665 M M.Nme510612ORF1764P (99% identity) ACACC M.Nme12I
5670 R Nme98ORF5695P (100% identity) ACACC Nme12IP
5675 alpha-hydroxy-acid oxidizing protein