Neisseria meningitidis 11-7 |
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Putative Neisseria meningitidis 11-7 RM systems
Ref: Stenmark,B. et al. unpublished
REBASE ref # 21229
Complete sequence: 2,157,444 bp
GenBank #: CP021520
REBASE acronym: Nme117
Org_num: 18028
All begin CCD84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2745 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 2750 | M | M.Nme98ORF2765P (100% identity) | M.Nme117ORF2750P | |
| 2755 | cell filamentation protein Fic | |||
| 2760 | S | S.NmeAORF1038P (48% identity) | S1.Nme117ORF2750P | |
| 2765 | IS30 family transposase | |||
| 2770 | S | type I restriction endonuclease subunit S | S2.Nme117ORF2750P | |
| 2775 | IS1595 family transposase ISNme3 | |||
| 2780 | S | S3.Nme98ORF2765P (100% identity) | S3.Nme117ORF2750P | |
| 2785 | R | Nme98ORF2765P (100% identity) | Nme117ORF2750P | |
| 2790 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4860 | ABC transporter | |||
| 4865 | M | M.Nme98I (100% identity) | CACNNNNNTAC | M.Nme117I |
| 4870 | S | S.Nme98I (100% identity) | CACNNNNNTAC | S.Nme117I |
| 4875 | R | Nme98IP (100% identity) | CACNNNNNTAC | Nme117IP |
| 4880 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 40 | leucine--tRNA ligase | |||
| 45 | M | M1.Nme98ORF45P (100% identity) | GATC | M1.Nme117ORF45P |
| 50 | M | M2.Nme98ORF45P (100% identity) | GATC | M2.Nme117ORF45P |
| 55 | 184 aa hypothetical protein | |||
| 2730 | D-glycero-beta-D-manno-heptose-7-phosphate | |||
| 2735 | M | M.NmeW135ORF855P (100% identity) | CCAGA | M.Nme117ORF2735P |
| ??? | R | Nme98ORF2750P (100% identity) | CCAGA | Nme117ORF2735P |
| 2745 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 3450 | transposase | |||
| 3455 | M | M.Nme98ORF3460P (100% identity) | ACCTGC | M.Nme117ORF3455P |
| 3460 | HNH endonuclease | |||
| 4975 | 3-isopropylmalate dehydratase small subunit | |||
| 4980 | M | M.NmeMC58ORF1033P (100% identity) | GGNNCC | M.Nme117ORF4980P |
| 4985 | R | Nme95IIP (100% identity) | GGNNCC | Nme117ORF4980P |
| 4990 | 3-isopropylmalate dehydrogenase | |||
| 5190 | ribonucleotide-diphosphate reductase subunit | |||
| 5195 | R | NmeMC58ORF1290P (100% identity) | CCWGG | Nme117ORF5200P |
| 5200 | M | M.Nme98ORF5200P (100% identity) | CCWGG | M.Nme117ORF5200P |
| 5205 | ribonucleoside-diphosphate reductase subunit | |||
| 7005 | 243 aa hypothetical protein | |||
| 7010 | RM | Nme98ORF7020AP (100% identity) | Nme117ORF7010AP | |
| 7015 | RM | Nme98ORF7020BP (100% identity) | Nme117ORF7010BP | |
| 7020 | pilS cassette | |||
| 10365 | RNA-binding transcriptional accessory protein | |||
| 10370 | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M1.Nme117ORF10370P |
| 10375 | M | Rieske (2Fe-2S) protein | M2.Nme117ORF10370P | |
| 10380 | UDP-glucose 4-epimerase GalE | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5690 | tRNA pseudouridine(55) synthase TruB | |||
| 5695 | M | M.Nme2136ORF1274P (99% identity) | ACACC | M.Nme117ORF5695P |
| 5700 | R | Nme98ORF5695P (100% identity) | ACACC | Nme117ORF5695P |
| 5705 | alpha-hydroxy-acid oxidizing enzyme | |||