Tissierella creatinophila DSM 6911 |
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Putative Tissierella creatinophila DSM 6911 RM systems
Ref: Poehlein,A. and Daniel,R. unpublished
REBASE ref # 23878
Contig set: 2,530,461 bp
GenBank #: LTDM00000000 (NZ_LTDM00000000)
REBASE acronym: Tcr6911
Org_num: 23639
All begin TICRE_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17750 | 145 aa hypothetical protein | |||
| 17760 | M | M.Efa120714ORF12730P (56% identity) | M.Tcr6911ORF17760P | |
| 17770 | 159 aa hypothetical protein | |||
| 20900 | DNA-binding transcriptional repressor PuuR | |||
| 20910 | S | S.Tko3924ORF220P (33% identity) | S1.Tcr6911ORF20960P | |
| 20920 | tyrosine recombinase XerC | |||
| 20930 | S | S3.Tcr6911ORF20960P (61% identity) | S2.Tcr6911ORF20960P | |
| 20940 | R | Cco13028IP (85% identity) | Tcr6911ORF20960P | |
| 20950 | S | S.Lpe20310ORFBP (30% identity) | S3.Tcr6911ORF20960P | |
| 20960 | M | M.Cco13028I (84% identity) | M.Tcr6911ORF20960P | |
| 20970 | 69 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12700 | R | R1.AspC6ORF6305P (71% identity) | Tcr6911ORF12710P | |
| 12710 | M | M2.AspC6ORF6305P (89% identity) | M1.Tcr6911ORF12710P | |
| 12720 | M | M1.AspC6ORF6305P (81% identity) | M2.Tcr6911ORF12710P | |
| 12730 | helix-turn-helix domain protein | |||
| ??? | R | R2.AspC6ORF6305P (70% identity) | Tcr6911ORF23790P | |
| 23810 | CGNR zinc finger | |||
| 15790 | M | M.Swo4J5ORFHP (54% identity) | M.Tcr6911ORF15790P | |
| ??? | R | AspAD10ORF23790P (37% identity) | Tcr6911ORF15790P | |
| 15820 | tyrosine recombinase XerD | |||
| 15190 | 202 aa hypothetical protein | |||
| 15200 | M | M.Ahy25ORF1538P (64% identity) | M.Tcr6911ORF15200P | |
| 15210 | R | Rsp8817ORF2001P (44% identity) | Tcr6911ORF15200P | |
| 15220 | 113 aa hypothetical protein | |||
| 13220 | 128 aa hypothetical protein | |||
| 13230 | M | M2.HovKG36ORF5035P (79% identity) | M1.Tcr6911ORF13230P | |
| 13240 | R | HovKG36ORF5035P (60% identity) | Tcr6911ORF13230P | |
| 13250 | M | M1.HovKG36ORF5035P (80% identity) | M2.Tcr6911ORF13230P | |
| 13260 | 78 aa hypothetical protein | |||
| 3920 | 85 aa hypothetical protein | |||
| 3930 | M | M.Tpr11158ORF2037P (61% identity) | M.Tcr6911ORF3930P | |
| 3940 | 116 aa hypothetical protein | |||
| 23930 | S-adenosylmethionine synthase | |||
| 23940 | M | M2.EspLV19ORF6765P (98% identity) | M1.Tcr6911ORF23940P | |
| 23950 | M | M2.LmoB2418ORF1369P (98% identity) | M2.Tcr6911ORF23940P | |
| 23960 | 230 aa hypothetical protein | |||
| 4110 | 166 aa hypothetical protein | |||
| 4120 | M | M.Tpr11158ORF2061P (91% identity) | M.Tcr6911ORF4120P | |
| 4130 | bifunctional ligase/repressor BirA | |||
| 13740 | 60 aa hypothetical protein | |||
| 13750 | M | M2.Yfr2321ORF214020P (81% identity) | M1.Tcr6911ORF13750P | |
| 13760 | M | M1.DhaPCSSORF3557P (57% identity) | M2.Tcr6911ORF13750P | |
| 13770 | divergent AAA domain protein | |||
| 11660 | 181 aa hypothetical protein | |||
| 11670 | M | M.Aco30302ORF5850P (60% identity) | M.Tcr6911ORF11670P | |
| 11680 | 87 aa hypothetical protein | |||
| 5070 | relaxase/mobilization nuclease domain protein | |||
| 5080 | M | M.Cco2909ORF2174P (80% identity) | M.Tcr6911ORF5080P | |
| 5090 | cardiolipin synthase | |||
| 5140 | RNA polymerase-associated protein RapA | |||
| 5150 | M | M.Cco2909ORF2182P (78% identity) | M.Tcr6911ORF5150P | |
| 5160 | 1245 aa hypothetical protein | |||
| 22540 | DNA topoisomerase 3 | |||
| 22550 | M | M.Cli100320ORF9310P (88% identity) | M.Tcr6911ORF22550P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1100 | 77 aa hypothetical protein | |||
| 1110 | R | Cac10703ORF4930P (73% identity) | Tcr6911ORF1120P | |
| 1120 | M | M.PmeBin103ORFBP (48% identity) | M.Tcr6911ORF1120P | |
| 1130 | 41 aa hypothetical protein | |||
| 4780 | tRNA threonylcarbamoyladenosine biosynthesis | |||
| 4790 | R | TspRe1ORF834P (65% identity) | Tcr6911ORF4790P | |
| 4800 | recombinase | |||
| 12190 | peptide methionine sulfoxide reductase | |||
| 12200 | M | M.TspYu01ORF2095P (45% identity) | M.Tcr6911ORF12200P | |
| 12210 | 114 aa hypothetical protein | |||
| 22350 | 145 aa hypothetical protein | |||
| 22360 | M | M.Cbo38028ORF2180P (43% identity) | M.Tcr6911ORF22360P | |
| 22370 | R | Cul10521ORFEP (62% identity) | Tcr6911ORF22360P | |
| 22380 | 273 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1080 | 70 aa hypothetical protein | |||
| 1090 | R | MvaFGP2MrrP (29% identity) | Tcr6911MrrP | |
| 1100 | 77 aa hypothetical protein | |||