Ref: Poehlein,A. and Daniel,R. unpublished

REBASE ref # 23878

Contig set: 2,530,461 bp

GenBank #: LTDM00000000 (NZ_LTDM00000000)

REBASE acronym: Tcr6911

Org_num: 23639

 

All begin TICRE_

Type I
ORF Gene Most similar Specificity Name
 
17750 145 aa hypothetical protein
17760 M M.Efa120714ORF12730P (56% identity) M.Tcr6911ORF17760P
17770 159 aa hypothetical protein
 
20900 DNA-binding transcriptional repressor PuuR
20910 S type I restriction modification DNA specificity S1.Tcr6911ORF20960P
20920 tyrosine recombinase XerC
20930 S S3.Tcr6911ORF20960P (61% identity) S2.Tcr6911ORF20960P
20940 R Cco13028IP (85% identity) Tcr6911ORF20960P
20950 S S.Lpe20310ORFBP (30% identity) S3.Tcr6911ORF20960P
20960 M M.Cco13028I (84% identity) M.Tcr6911ORF20960P
20970 69 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
12700 R R1.PfrMB139ORFCP (52% identity) Tcr6911ORF12710P
12710 M M.PfrMB139ORFBP (76% identity) M1.Tcr6911ORF12710P
12720 M M1.Lcu401ORF9420P (57% identity) M2.Tcr6911ORF12710P
12730 helix-turn-helix domain protein
 
??? R R2.Ssp2304ORF10105P (43% identity) Tcr6911ORF23790P
23810 CGNR zinc finger
 
15790 M M.Swo4J5ORFHP (54% identity) M.Tcr6911ORF15790P
??? R hypothetical protein Tcr6911ORF15790P
15820 tyrosine recombinase XerD
 
15190 202 aa hypothetical protein
15200 M M.Ahy25ORF1538P (64% identity) M.Tcr6911ORF15200P
15210 R Rsp8817ORF2001P (44% identity) Tcr6911ORF15200P
15220 113 aa hypothetical protein
 
13220 128 aa hypothetical protein
13230 M M.Pha13077ORF1306P (78% identity) M1.Tcr6911ORF13230P
13240 R Pha13077ORF1309P (58% identity) Tcr6911ORF13230P
13250 M M.Pha13077ORF1309P (80% identity) M2.Tcr6911ORF13230P
13260 78 aa hypothetical protein
 
3920 85 aa hypothetical protein
3930 M M.Tpr11158ORF2037P (61% identity) M.Tcr6911ORF3930P
3940 116 aa hypothetical protein
 
23930 S-adenosylmethionine synthase
23940 M M2.EspLV19ORF6765P (98% identity) M1.Tcr6911ORF23940P
23950 M M2.LmoB2418ORF1369P (98% identity) M2.Tcr6911ORF23940P
23960 230 aa hypothetical protein
 
4110 166 aa hypothetical protein
4120 M M.Tpr11158ORF2061P (91% identity) M.Tcr6911ORF4120P
4130 bifunctional ligase/repressor BirA
 
13740 60 aa hypothetical protein
13750 M M2.Yfr2321ORF214020P (81% identity) M1.Tcr6911ORF13750P
13760 M M1.DhaPCSSORF3557P (57% identity) M2.Tcr6911ORF13750P
13770 divergent AAA domain protein
 
11660 181 aa hypothetical protein
11670 M M.Aco30302ORF5850P (60% identity) M.Tcr6911ORF11670P
11680 87 aa hypothetical protein
 
5070 relaxase/mobilization nuclease domain protein
5080 M M.Cco2909ORF2174P (80% identity) M.Tcr6911ORF5080P
5090 cardiolipin synthase
 
5140 RNA polymerase-associated protein RapA
5150 M M.Cco2909ORF2182P (78% identity) M.Tcr6911ORF5150P
5160 1245 aa hypothetical protein
 
22540 DNA topoisomerase 3
22550 M M.Cli100320ORF9310P (88% identity) M.Tcr6911ORF22550P
Type III
ORF Gene Most similar Specificity Name
 
1100 77 aa hypothetical protein
1110 R Cac10703ORF4930P (73% identity) Tcr6911ORF1120P
1120 M M.Osp396ORF10885P (40% identity) M.Tcr6911ORF1120P
1130 41 aa hypothetical protein
 
4780 tRNA threonylcarbamoyladenosine biosynthesis
4790 R TspRe1ORF834P (65% identity) Tcr6911ORF4790P
4800 recombinase
 
12190 peptide methionine sulfoxide reductase
12200 M M.KpaKD1ORF7330P (44% identity) M.Tcr6911ORF12200P
12210 114 aa hypothetical protein
 
22350 145 aa hypothetical protein
22360 M M.Cbo38028ORF2180P (45% identity) M.Tcr6911ORF22360P
22370 R Cul10521ORFEP (62% identity) Tcr6911ORF22360P
22380 273 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
1080 70 aa hypothetical protein
1090 R MvaFGP2MrrP (29% identity) Tcr6911MrrP
1100 77 aa hypothetical protein