Neisseria meningitidis 13-600 |
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Putative Neisseria meningitidis 13-600 RM systems
Ref: Stenmark,B. et al. unpublished
REBASE ref # 21229
Complete sequence: 2,170,095 bp
GenBank #: CP021723
REBASE acronym: Nme600
Org_num: 17960
All begin CCD89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2730 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 2735 | M | M.Nme98ORF2765P (100% identity) | M.Nme600ORF2735P | |
| 2740 | cell filamentation protein Fic | |||
| 2745 | S | S.NmeW135ORF858P (100% identity) | S1.Nme600ORF2735P | |
| 2750 | IS1595 family transposase ISNme3 | |||
| 2755 | S | S3.Nme98ORF2765P (100% identity) | S2.Nme600ORF2735P | |
| 2760 | R | Nme98ORF2765P (100% identity) | Nme600ORF2735P | |
| 2765 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4815 | ABC transporter | |||
| 4820 | M | M.Nme98I (100% identity) | CACNNNNNTAC | M.Nme600I |
| 4825 | S | 80 aa hypothetical protein | S.Nme600IBP | |
| 4830 | IS1595 family transposase ISNme3 | |||
| 4835 | S | S.Nme98I (77% identity) | S.Nme600IAP | |
| 4840 | R | Nme98IP (100% identity) | CACNNNNNTAC | Nme600IP |
| 4845 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | IS5 family transposase | |||
| 50 | M | M1.Nme98ORF45P (100% identity) | GATC | M1.Nme600ORF50P |
| 55 | M | M2.Nme98ORF45P (100% identity) | GATC | M2.Nme600ORF50P |
| 60 | 184 aa hypothetical protein | |||
| 2715 | D-glycero-beta-D-manno-heptose-7-phosphate | |||
| 2720 | M | M.NmeW135ORF855P (100% identity) | CCAGA | M.Nme600ORF2720P |
| ??? | R | Nme98ORF2750P (100% identity) | CCAGA | Nme600ORF2720P |
| 2730 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 3400 | transposase | |||
| 3405 | M | M.Nme98ORF3460P (100% identity) | M.Nme600ORF3405P | |
| 3410 | HNH endonuclease | |||
| 4930 | 3-isopropylmalate dehydratase small subunit | |||
| 4935 | M | M.NmeMC58ORF1033P (100% identity) | GGNNCC | M.Nme600ORF4935P |
| 4940 | R | Nme95IIP (100% identity) | GGNNCC | Nme600ORF4935P |
| 4945 | 3-isopropylmalate dehydrogenase | |||
| 5145 | ribonucleotide-diphosphate reductase subunit | |||
| 5150 | R | NmeMC58ORF1290P (100% identity) | Nme600ORF5155P | |
| 5155 | M | M.Nme98ORF5200P (100% identity) | CCWGG | M.Nme600ORF5155P |
| 5160 | ribonucleoside-diphosphate reductase subunit | |||
| 6980 | 243 aa hypothetical protein | |||
| 6985 | RM | Nme98ORF7020AP (100% identity) | Nme600ORF6985AP | |
| 6990 | RM | Nme98ORF7020BP (100% identity) | Nme600ORF6985BP | |
| 6995 | pilS cassette | |||
| 10400 | RNA-binding transcriptional accessory protein | |||
| 10405 | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M1.Nme600ORF10405P |
| 10410 | M | M.NmeST254ORF61P (100% identity) | GGTGA | M2.Nme600ORF10405P |
| 10415 | UDP-glucose 4-epimerase GalE | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5645 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | Kki10746ORF939P (52% identity) | M.Nme600ORF5650P | |
| 5660 | R | Nme98ORF5695P (100% identity) | Nme600ORF5650P | |
| 5665 | alpha-hydroxy-acid oxidizing enzyme | |||