Laribacter hongkongensis LHGZ1 |
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Putative Laribacter hongkongensis LHGZ1 RM systems
Ref: Chen,D. et al. unpublished
REBASE ref # 24277
Complete sequence: 3,424,272 bp
GenBank #: CP022115
REBASE acronym: LhoZ1
Org_num: 23754
All begin LHGZ1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 799 | KilA domain-containing protein | |||
| 800 | M | M.LhoZ1ORF800P (100% identity) | GAAYNNNNRTGC | M.LhoZ1IV |
| 801 | S | S.LhoZ1ORF800P (100% identity) | GAAYNNNNRTGC | S.LhoZ1IV |
| 802 | R | LhoZ1ORF800P (100% identity) | GAAYNNNNRTGC | LhoZ1IVP |
| 803 | 134 aa hypothetical protein | |||
| 799 | KilA domain-containing protein | |||
| 800 | M | M.LhoZ1IV (100% identity) | GAAYNNNNRTGC | M.LhoZ1ORF800P |
| 801 | S | S.LhoZ1IV (100% identity) | GAAYNNNNRTGC | S.LhoZ1ORF800P |
| 802 | R | LhoZ1IVP (100% identity) | GAAYNNNNRTGC | LhoZ1ORF800P |
| 803 | 134 aa hypothetical protein | |||
| 970 | transcriptional regulator | |||
| 971 | M | M.Lho2398ORFGP (94% identity) | CCAYNNNNNTGA | M.LhoZ1II |
| ??? | S | S.Lho2398ORFGP (100% identity) | CCAYNNNNNTGA | S.LhoZ1II |
| 973 | DUF4209 domain containing protein | |||
| 974 | R | Lho2398ORFGP (100% identity) | CCAYNNNNNTGA | LhoZ1IIP |
| 975 | DUF262 multi-domain protein | |||
| 1448 | uncharacterized protein | |||
| 1449 | R | Lho2398ORFIP (97% identity) | GCCNNNNNCTCC | LhoZ1IP |
| 1450 | S | S.Lho2398ORFIP (100% identity) | GCCNNNNNCTCC | S.LhoZ1I |
| 1451 | DNA helicase | |||
| 1452 | ATP-dependent endonuclease of the OLD | |||
| 1453 | M | M2.Lho2398ORFIP (100% identity) | GCCNNNNNCTCC | M2.LhoZ1I |
| 1454 | M | M1.Lho2398ORFIP (99% identity) | GCCNNNNNCTCC | M1.LhoZ1I |
| 1455 | 135 aa hypothetical protein | |||
| 2907 | DUF262 multi-domain protein | |||
| ??? | M | M.Lho2398ORFKP (100% identity) | CAGNNNNNNCTCG | M.LhoZ1III |
| 2909 | S | S.Lho2398ORFKP (100% identity) | CAGNNNNNNCTCG | S.LhoZ1III |
| 2910 | R | Lho2398ORFKP (100% identity) | CAGNNNNNNCTCG | LhoZ1IIIP |
| 2911 | von Willebrand factor type A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 353 | transcriptional regulator | |||
| ??? | M | M.Lho2398ORFNP (100% identity) | M.LhoZ1ORFAP | |
| ??? | very short patch repair endonuclease | |||
| ??? | DNA -methyltransferase | |||
| ??? | V | V.Lho2398ORFNP (100% identity) | V.LhoZ1ORFBP | |
| 355 | helicase domain protein | |||
| 357 | 210 aa hypothetical protein | |||
| 358 | RM | Lho2398ORFFP (100% identity) | LhoZ1ORF358P | |
| 359 | histidine kinase | |||
| 948 | 82 aa hypothetical protein | |||
| 949 | M | M1.Lho2398ORFDP (96% identity) | M1.LhoZ1ORF949P | |
| 950 | M | M2.Lho2398ORFDP (87% identity) | M2.LhoZ1ORF949P | |
| 951 | RNA polymerase subunit sigma | |||
| 1006 | 122 aa hypothetical protein | |||
| 1007 | M | M1.Lho2398ORFHP (76% identity) | AB | M1.LhoZ1ORF1007P |
| 1008 | M | M2.Lho2398ORFHP (95% identity) | M2.LhoZ1ORF1007P | |
| 1009 | RNA polymerase subunit sigma | |||
| 1490 | 53 aa hypothetical protein | |||
| 1491 | M | M.Lho2398ORFBP (81% identity) | M.LhoZ1ORF1491P | |
| 1492 | 42 aa hypothetical protein | |||
| 1951 | 662 aa hypothetical protein | |||
| ??? | M | M.Lho2398ORFAP (100% identity) | GATC | M.LhoZ1ORF1952P |
| 1953 | 40 aa hypothetical protein | |||
| 2876 | 82 aa hypothetical protein | |||
| 2877 | M | M1.Lho2398ORFJP (100% identity) | AB | M1.LhoZ1ORF2877P |
| 2878 | peptidase M15 | |||
| 2879 | M | M2.Lho2398ORFJP (100% identity) | M2.LhoZ1ORF2877P | |
| 2880 | 53 aa hypothetical protein | |||
| 2960 | 74 aa hypothetical protein | |||
| 2961 | M | M1.Lho2398ORFLP (100% identity) | AB | M1.LhoZ1ORF2961P |
| 2962 | M | M2.Lho2398ORFLP (90% identity) | M2.LhoZ1ORF2961P | |
| 2963 | RNA polymerase subunit sigma | |||
| 3480 | DNA binding domain, excisionase family | |||
| 3481 | V | V.LhoHORF3244P (97% identity) | V.LhoZ1ORF3482P | |
| 3482 | M | M.Lho2398ORFMP (100% identity) | CCWGG | M.LhoZ1ORF3482P |
| 3483 | 88 aa hypothetical protein | |||