Capnocytophaga species ChDC OS43 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Capnocytophaga species ChDC OS43 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 18726
Complete sequence: 3,412,686 bp
GenBank #: CP022022
REBASE acronym: CspOS43
Org_num: 25043
All begin CBG49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12445 | AAA family ATPase | |||
| 12450 | S | S.Coc26681ORF5600P (66% identity) | S.CspOS43ORF12455P | |
| 12455 | M | M.Coc26681ORF5600P (83% identity) | M.CspOS43ORF12455P | |
| 12460 | urease-associated protein | |||
| 15675 | integrase | |||
| 15680 | S | S2.Coc1550ORF7630P (28% identity) | S1.CspOS43ORF5P | |
| 15685 | S | S1.CleH6253ORF7835P (60% identity) | S2.CspOS43ORF5P | |
| 15690 | S | S2.BdoJR05I (51% identity) | S3.CspOS43ORF5P | |
| 5 | M | M.Coc1550ORF7630P (99% identity) | M.CspOS43ORF5P | |
| 10 | R | Coc1550ORF7630P (97% identity) | CspOS43ORF5P | |
| 15 | acyl-CoA--6-aminopenicillanic acid | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1200 | 59 aa hypothetical protein | |||
| 1205 | R | Psp4590ORF6415P (59% identity) | CspOS43ORF1210P | |
| 1210 | M | M2.Psp4590ORF6415P (69% identity) | M1.CspOS43ORF1210P | |
| 1215 | M | M1.Psp4590ORF6415P (80% identity) | M2.CspOS43ORF1210P | |
| 1220 | serine--tRNA ligase | |||
| 1330 | methyltransferase | |||
| 1335 | M | M.Csp10638II (87% identity) | M.CspOS43ORF1335P | |
| 1340 | R | Csp10638IIP (86% identity) | CspOS43ORF1335P | |
| 1345 | DNA polymerase I | |||
| 2435 | cell surface protein | |||
| 2440 | M | M1.Csp6490ORF3875P (98% identity) | M1.CspOS43ORF2440P | |
| 2445 | 173 aa hypothetical protein | |||
| 2450 | M | M2.Csp6490ORF3875P (97% identity) | M2.CspOS43ORF2440P | |
| 2455 | glutamine synthetase type III | |||
| 3015 | glycosidase | |||
| 3020 | R | Cgr12948ORF899P (76% identity) | CspOS43ORF3025P | |
| 3025 | M | M.Coc2191ORF1390P (98% identity) | GGNCC | M.CspOS43ORF3025P |
| 3030 | 88 aa hypothetical protein | |||
| 8465 | DNA modification methylase | |||
| 8470 | RM | CspF0512ORF2405P (85% identity) | CspOS43ORF8470P | |
| 8475 | helicase | |||
| 15535 | 226 aa hypothetical protein | |||
| 15540 | RM | Cgr12948ORF381P (88% identity) | CspOS43ORF15540P | |
| 15545 | 294 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13905 | 257 aa hypothetical protein | |||
| 13910 | R | PspF4M1ORF1650P (56% identity) | CspOS43ORF13910P | |
| 13915 | site-specific DNA-methyltransferase | |||
| 13910 | restriction endonuclease subunit R | |||
| 13915 | M | M.Psp4590ORF1885P (33% identity) | M.CspOS43ORF13915P | |
| 13920 | cell division protein FtsK | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5545 | 247 aa hypothetical protein | |||
| ??? | R | CspKC1668McrCP (81% identity) | CspOS43McrC2P | |
| 5560 | R | CspKC1668McrBP (39% identity) | CspOS43McrB2P | |
| 5565 | integrase | |||
| 9135 | transcriptional regulator | |||
| ??? | R | CspF0545McrBP (63% identity) | CspOS43McrBP | |
| 9145 | R | Coc11546McrCP (86% identity) | CspOS43McrCP | |
| 9150 | SAM-dependent methyltransferase | |||