Chondrocystis species NIES-4102 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Chondrocystis species NIES-4102 RM systems
Ref: Hirose,Y. et al. unpublished
REBASE ref # 24728
| Sequence length: | GenBank #: | |
| Chromosome: | 4,516,676 bp | AP018281 |
| plasmid plasmid2: | 123,154 bp | AP018283 |
REBASE acronym: Csp4102
Org_num: 24875
All begin NIES4102_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3960 | 148 aa hypothetical protein | |||
| 3970 | M | M.AvaORF499P (56% identity) | M.Csp4102ORF3970P | |
| 3980 | 81 aa hypothetical protein | |||
| 3990 | 73 aa hypothetical protein | |||
| 4000 | 118 aa hypothetical protein | |||
| 4010 | 66 aa hypothetical protein | |||
| 4020 | 122 aa hypothetical protein | |||
| 4030 | R | Nca2107ORF54080P (74% identity) | Csp4102ORF3970P | |
| 4040 | 490 aa hypothetical protein | |||
| 15070 | NAD(P)H-quinone oxidoreductase subunit L | |||
| 15080 | R | Mre10914ORFMP (70% identity) | Csp4102ORF15160P | |
| 15090 | 179 aa hypothetical protein | |||
| 15100 | 79 aa hypothetical protein | |||
| 15110 | 32 aa hypothetical protein | |||
| 15120 | 41 aa hypothetical protein | |||
| 15130 | S | S.Gsp1H9ORFDP (44% identity) | S.Csp4102ORF15160P | |
| 15140 | plasmid stabilization system | |||
| 15150 | 84 aa hypothetical protein | |||
| 15160 | M | M.CspCCYORF15325P (88% identity) | M.Csp4102ORF15160P | |
| 15170 | ATP-dependent chaperone ClpB | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7630 | helicase-like protein | |||
| 7640 | M | M.PspFMAR1ORFEP (61% identity) | M.Csp4102ORF7640P | |
| 7650 | 99 aa hypothetical protein | |||
| 15310 | DnaB helicase | |||
| 15320 | M | M.Scy7437ORF2580P (69% identity) | M.Csp4102ORF15320P | |
| 15330 | 372 aa hypothetical protein | |||
| 15690 | 50S ribosomal protein L12 | |||
| 15700 | M | M.Hsp7418DndCP (62% identity) | M.Csp4102DndCP | |
| 15710 | 137 aa hypothetical protein | |||
| 19390 | photosystem II protein Psb27 | |||
| 19400 | M | M.Dsp315AORF3411P (56% identity) | M.Csp4102ORF19400P | |
| 19410 | 85 aa hypothetical protein | |||
| 22260 | M28A family peptidase | |||
| 22270 | M | M.PspFMAR1ORFJP (75% identity) | M.Csp4102ORF22270P | |
| 22280 | glycine oxidase ThiO | |||
| 23770 | ABC-2 type transporter protein | |||
| 23780 | M | M.Cep9333ORF2153P (69% identity) | M.Csp4102ORF23780P | |
| 23790 | R | Cep9333ORF2153P (50% identity) | Csp4102ORF23780P | |
| 23800 | HAD family hydrolase | |||
| 24260 | 56 aa hypothetical protein | |||
| 24270 | M | M.CraN8ORFPP (58% identity) | M.Csp4102ORF24270P | |
| 24280 | 240 aa hypothetical protein | |||
| 24290 | R | CspNUC1ORF19075P (69% identity) | Csp4102ORF24270P | |
| 24300 | 194 aa hypothetical protein | |||
| 25590 | 203 aa hypothetical protein | |||
| 25600 | RM | Ael3563ORF17465P (68% identity) | Csp4102ORF25600P | |
| 25610 | cryptochrome, DASH family protein | |||
| 31980 | 129 aa hypothetical protein | |||
| 31990 | RM | Mae2549ORF2220P (69% identity) | Csp4102ORF31990P | |
| 32000 | monooxygenase, FAD-binding protein | |||
| 34640 | PBS lyase HEAT domain protein repeat-containing | |||
| 34650 | M | M.PspFMAR1DndDP (74% identity) | M.Csp4102DndDP | |
| 34660 | ketol-acid reductoisomerase | |||
| plasmid plasmid2 | ||||
| 41280 | 129 aa hypothetical protein | |||
| 41290 | R | Pte9214ORF5396P (49% identity) | Csp4102ORF41290P | |
| 41300 | pentapeptide repeat protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid plasmid2 | ||||
| 41480 | XRE family transcriptional regulator | |||
| 41490 | R | Fsp4106ORF61200P (79% identity) | Csp4102ORF41500P | |
| 41500 | M | M.Rsp7116ORF1817P (73% identity) | M.Csp4102ORF41500P | |
| 41510 | 94 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25140 | 138 aa hypothetical protein | |||
| 25150 | R | Ssp3757MrrP (64% identity) | Csp4102MrrP | |
| 25160 | methionine synthase | |||