Fremyella diplosiphon NIES-3275 |
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Putative Fremyella diplosiphon NIES-3275 RM systems
Ref: Hirose,Y. et al. unpublished
REBASE ref # 24728
| Sequence length: | GenBank #: | |
| Chromosome: | 8,894,230 bp | AP018233 |
| plasmid plasmid03: | 152,957 bp | AP018236 |
| plasmid plasmid05: | 84,811 bp | AP018238 |
| plasmid plasmid07: | 55,884 bp | AP018240 |
REBASE acronym: Fdi3275
Org_num: 24868
All begin NIES3275_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 34520 | helicase superfamily protein | |||
| 34530 | R | Tsp7712ORF29650BP (81% identity) | Fdi3275ORF34600BP | |
| 34540 | 129 aa hypothetical protein | |||
| 34550 | 466 aa hypothetical protein | |||
| 34560 | R | Tsp7601ORF1695AP (100% identity) | Fdi3275ORF34600AP | |
| 34570 | S | S.Tsp7712ORF29650P (100% identity) | S.Fdi3275ORF34600P | |
| 34580 | plasmid maintenance system antidote protein | |||
| 34590 | killer suppression protein HigA | |||
| 34600 | M | M2.Tsp7601ORF1695P (100% identity) | M2.Fdi3275ORF34600P | |
| 34610 | M | M1.Tsp7712ORF29650P (95% identity) | M1.Fdi3275ORF34600P | |
| 34620 | 315 aa hypothetical protein | |||
| 62930 | 54 aa hypothetical protein | |||
| 62940 | M | M.Tsp7712ORF8055P (100% identity) | M.Fdi3275ORF62940P | |
| 62950 | transposase | |||
| 68740 | 65 aa hypothetical protein | |||
| 68750 | R | Tsp7712ORF10850P (100% identity) | Fdi3275ORF68830P | |
| 68760 | 303 aa hypothetical protein | |||
| 68770 | 129 aa hypothetical protein | |||
| 68780 | 77 aa hypothetical protein | |||
| 68790 | S | S.Tsp7712ORF10850P (100% identity) | S.Fdi3275ORF68830P | |
| 68800 | 166 aa hypothetical protein | |||
| 68810 | 82 aa hypothetical protein | |||
| 68820 | 94 aa hypothetical protein | |||
| 68830 | M | M.Tsp7712ORF10850P (100% identity) | M.Fdi3275ORF68830P | |
| 68840 | pyridine nucleotide-disulfide oxidoreductase | |||
| 70120 | 261 aa hypothetical protein | |||
| 70130 | M | M.Tsp7712ORF11480P (100% identity) | M.Fdi3275ORF70130P | |
| 70140 | WD-40 repeat protein | |||
| 70150 | 72 aa hypothetical protein | |||
| 70160 | 75 aa hypothetical protein | |||
| 70170 | 424 aa hypothetical protein | |||
| 70180 | restriction modification system DNA specificity | |||
| 70190 | 272 aa hypothetical protein | |||
| 70200 | ATP-binding protein | |||
| 70210 | integrase catalytic subunit | |||
| 70220 | S | S2.Tsp7712ORF11480P (100% identity) | S.Fdi3275ORF70130P | |
| 70230 | R | Tsp7712ORF11480P (98% identity) | Fdi3275ORF70130P | |
| 70240 | TPR repeat-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4060 | deoxyribose-phosphate aldolase | |||
| 4070 | M | M.Tsp7712ORF14375P (100% identity) | M.Fdi3275ORF4070P | |
| 4080 | 479 aa hypothetical protein | |||
| 8360 | cyanate lyase | |||
| 8370 | M | M.Tsp7712ORF16550P (100% identity) | M.Fdi3275ORF8370P | |
| 8380 | 64 aa hypothetical protein | |||
| 14530 | 482 aa hypothetical protein | |||
| 14540 | M | M.Tsp7712DndEP (100% identity) | M.Fdi3275DndEP | |
| 14550 | 126 aa hypothetical protein | |||
| 14560 | 82 aa hypothetical protein | |||
| 14570 | M | M.Tsp7712DndDP (100% identity) | M.Fdi3275DndDP | |
| 14580 | 145 aa hypothetical protein | |||
| 20240 | 433 aa hypothetical protein | |||
| 20250 | M | M.Tte7101DndCP (98% identity) | M.Fdi3275DndCP | |
| 20260 | 231 aa hypothetical protein | |||
| 20660 | 86 aa hypothetical protein | |||
| 20670 | M | M.Tsp7712ORF22725P (100% identity) | M.Fdi3275ORF20670P | |
| 20680 | R | Tsp7601ORF3589P (100% identity) | Fdi3275ORF20670P | |
| 20690 | integral membrane sensor signal transduction | |||
| 26040 | 148 aa hypothetical protein | |||
| 26050 | M | M.Tsp7712ORF25435P (100% identity) | M.Fdi3275ORF26050P | |
| 26060 | Phenazine biosynthesis PhzC/PhzF protein | |||
| 29460 | 590 aa hypothetical protein | |||
| 29470 | M | M.Tsp7712ORF27125P (100% identity) | M.Fdi3275ORF29470P | |
| 29480 | R | Tsp7712ORF27125P (100% identity) | Fdi3275ORF29470P | |
| 29490 | arsenical pump membrane protein | |||
| 31830 | 340 aa hypothetical protein | |||
| 31840 | RM | Tsp7712ORF28315P (100% identity) | Fdi3275ORF31840P | |
| 31850 | 189 aa hypothetical protein | |||
| 34420 | 102 aa hypothetical protein | |||
| 34430 | RM | Tsp7712ORF29570P (100% identity) | Fdi3275ORF34430P | |
| 34440 | transposase | |||
| 39030 | major facilitator transporter | |||
| 39040 | M | M.Tsp7712ORF31895P (100% identity) | M.Fdi3275ORF39040P | |
| 39050 | R | Tsp7712ORF31895P (100% identity) | Fdi3275ORF39040P | |
| 39060 | LuxR family transcriptional regulator | |||
| 53480 | 89 aa hypothetical protein | |||
| 53490 | M | M.Tsp7712ORF3440P (100% identity) | M.Fdi3275ORF53490P | |
| 53500 | 399 aa hypothetical protein | |||
| 54670 | 68 aa hypothetical protein | |||
| 54680 | M | M.Tsp7712ORF4010P (100% identity) | M.Fdi3275ORF54680P | |
| 54690 | 158 aa hypothetical protein | |||
| 55070 | GTP-binding protein TypA/BipA | |||
| 55080 | M | M.Tsp7712ORF4205P (100% identity) | M.Fdi3275ORF55080P | |
| 55090 | R | Tsp7712ORF4205P (100% identity) | Fdi3275ORF55080P | |
| 55100 | C | C.Tsp7712ORF4205P (100% identity) | C.Fdi3275ORF55080P | |
| 55110 | 187 aa hypothetical protein | |||
| 57310 | helicase domain-containing protein | |||
| 57320 | RM | Tsp7712ORF5320P (100% identity) | Fdi3275ORF57320P | |
| 57930 | helicase domain-containing protein | |||
| 57940 | RM | Tsp7712ORF5615P (100% identity) | Fdi3275ORF57940P | |
| 57950 | 264 aa hypothetical protein | |||
| 58270 | 211 aa hypothetical protein | |||
| 58280 | M | M.Tsp7712ORF5775P (100% identity) | M.Fdi3275ORF58280P | |
| 58290 | R | Tsp7712ORF5775P (100% identity) | Fdi3275ORF58280P | |
| 58300 | 159 aa hypothetical protein | |||
| 61130 | 240 aa hypothetical protein | |||
| ??? | M | M.Tsp7601ORF2301P (100% identity) | M.Fdi3275ORF61140P | |
| 61150 | NAD(P)H-quinone oxidoreductase subunit D | |||
| plasmid plasmid03 | ||||
| 74320 | anthranilate phosphoribosyltransferase | |||
| 74330 | M | M.Tsp7712ORF12175P (100% identity) | M.Fdi3275ORF74330P | |
| 74340 | high light inducible protein | |||
| plasmid plasmid05 | ||||
| 77280 | fdxN element excision controlling factor protein | |||
| 77290 | M | M.Tsp7712ORF39255P (100% identity) | M.Fdi3275ORF77290P | |
| 77300 | 212 aa hypothetical protein | |||
| plasmid plasmid07 | ||||
| 78830 | 254 aa hypothetical protein | |||
| 78840 | M | M.Tsp7712ORF38600P (100% identity) | M.Fdi3275ORF78840P | |
| 78850 | 99 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 66100 | 81 aa hypothetical protein | |||
| 66110 | R | Tsp7712MrrP (100% identity) | Fdi3275MrrP | |
| 66120 | alanyl-tRNA synthetase | |||
| 69490 | 143 aa hypothetical protein | |||
| 69500 | R | Tsp7601McrBP (100% identity) | Fdi3275McrBP | |
| 69510 | R | Tsp7712McrCP (90% identity) | Fdi3275McrCP | |
| 69520 | peptidoglycan binding domain-containing protein | |||