Ref: Hirose,Y. et al. unpublished

REBASE ref # 24728

Sequence length:GenBank #:
Chromosome: 6,452,482 bp AP018222
plasmid plasmid1: 1,784,048 bp AP018223
plasmid plasmid2: 227,385 bp AP018224
plasmid plasmid3: 89,634 bp AP018225

REBASE acronym: Nli25

Org_num: 24886

 

All begin NIES25_

Type I
ORF Gene Most similar Specificity Name
 
plasmid plasmid1
 
56660 238 aa hypothetical protein
56670 R type I restriction-modification system R Nli25ORF56720P
56680 PilT protein domain protein
56690 98 aa hypothetical protein
56700 S S.PbaETAA8ORF9230P (36% identity) S.Nli25ORF56720P
56710 206 aa hypothetical protein
56720 M M.NspKEnORFOP (72% identity) M.Nli25ORF56720P
56730 zeta-carotene desaturase
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
10570 158 aa hypothetical protein
10580 R Nsp210ORF3630P (80% identity) Nli25ORF10580P
10590 nitrogen fixation protein
 
20740 cyanate hydratase
20750 M M.NflNUN1ORF4597P (91% identity) M.Nli25ORF20750P
20760 64 aa hypothetical protein
 
23830 helicase domain-containing protein
23840 RM NcoHK02ORF26450P (79% identity) Nli25ORF23840P
23850 GAF sensor protein
 
28080 group 1 glycosyl transferase
28090 M M.Nca389ORF17010P (89% identity) M.Nli25ORF28090P
28100 deoxyribose-phosphate aldolase
 
33780 536 aa hypothetical protein
33790 M M.Nca389ORF35745P (87% identity) M.Nli25ORF33790P
33800 68 aa hypothetical protein
 
34840 lipid-A-disaccharide synthase
34850 M M.Nca389ORF18120P (86% identity) M.Nli25ORF34850P
34860 180 aa hypothetical protein
 
37320 1306 aa hypothetical protein
37330 R NcoHK02ORF31240P (96% identity) Nli25ORF37340P
37340 M M.Nca389ORF19275P (99% identity) M.Nli25ORF37340P
37350 141 aa hypothetical protein
 
37620 532 aa hypothetical protein
37630 M M.Nsp870DndCP (87% identity) M.Nli25DndCP
37640 108 aa hypothetical protein
 
37650 84 aa hypothetical protein
37660 M M.NcyWK1DndDP (89% identity) M.Nli25DndDP
37670 ATP-dependent metalloprotease FtsH
 
49830 314 aa hypothetical protein
49840 M M.Nsp53789ORF7925P (88% identity) M.Nli25ORF49840P
49850 ABC transporter-related protein
 
plasmid plasmid1
 
59320 anthranilate phosphoribosyltransferase
59330 M M.Nca389ORF18485P (84% identity) M.Nli25ORF59330P
59340 241 aa hypothetical protein
 
plasmid plasmid2
 
68090 955 aa hypothetical protein
68100 RM Tte7101ORF69220P (81% identity) Nli25ORF68100P
68110 185 aa hypothetical protein
 
plasmid plasmid3
 
69180 368 aa hypothetical protein
69190 R Nsp53789ORF33330P (90% identity) Nli25ORF69200P
69200 M M.Nsp53789ORF33330P (84% identity) M.Nli25ORF69200P
69210 192 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
46450 158 aa hypothetical protein
46460 R Nsp0702McrBP (90% identity) Nli25McrBP
46470 R Nsp0702McrCP (90% identity) Nli25McrCP
46480 crossover junction endodeoxyribonuclease RuvC