|
Putative Anabaena variabilis NIES-23 RM systems
Ref: Hirose,Y. et al. unpublished
REBASE ref # 24728
Sequence length: | GenBank #: | |
Chromosome: | 6,411,850 bp | AP018216 |
plasmid plasmid1: | 391,340 bp | AP018217 |
plasmid plasmid3: | 255,223 bp | AP018219 |
plasmid plasmid4: | 111,184 bp | AP018220 |
REBASE acronym: Ava23
Org_num: 24862
All begin NIES23_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
10890 | transposase | |||
10900 | R | 179 aa hypothetical protein | Ava23ORF10940P | |
10910 | 134 aa hypothetical protein | |||
10920 | 78 aa hypothetical protein | |||
??? | S | S.AvaORF2688P (100% identity) | S.Ava23ORF10940P | |
??? | M | M.Ava27893ORFPP (100% identity) | M.Ava23ORF10940P | |
10960 | 54 aa hypothetical protein | |||
18910 | 557 aa hypothetical protein | |||
18920 | R | AvaXIP (100% identity) | Ava23ORF18940P | |
18930 | 330 aa hypothetical protein | |||
18940 | M | M.AvaXI (100% identity) | M.Ava23ORF18940P | |
18950 | S | S.AvaXI (100% identity) | S.Ava23ORF18940P | |
18960 | 89 aa hypothetical protein | |||
20380 | 105 aa hypothetical protein | |||
20390 | R | AvaORF3620P (100% identity) | Ava23ORF20410P | |
20400 | 330 aa hypothetical protein | |||
20410 | M | M.AvaORF3620P (100% identity) | M.Ava23ORF20410P | |
20420 | 74 aa hypothetical protein | |||
20430 | 140 aa hypothetical protein | |||
20440 | S | S.AvaORF3620AP (100% identity) | S.Ava23ORF20410AP | |
20450 | transposase | |||
20460 | S | S2.Ava27893ORFNP (89% identity) | S.Ava23ORF20410BP | |
20470 | 123 aa hypothetical protein | |||
30100 | malic enzyme | |||
30110 | M | M.AvaORF4597P (100% identity) | M.Ava23ORF30110P | |
30120 | 85 aa hypothetical protein | |||
30130 | 192 aa hypothetical protein | |||
30140 | 89 aa hypothetical protein | |||
30150 | 143 aa hypothetical protein | |||
30160 | S | S.AvaORF4597P (100% identity) | S.Ava23ORF30110P | |
30170 | 224 aa hypothetical protein | |||
30180 | R | Ava27893ORFFP (100% identity) | Ava23ORF30110P | |
30190 | type I site-specific deoxyribonuclease chain R | |||
42880 | DegT/DnrJ/EryC1/StrS family protein | |||
42890 | M | M.AvaORF499P (100% identity) | M.Ava23ORF42890P | |
42900 | 65 aa hypothetical protein | |||
42910 | 58 aa hypothetical protein | |||
42920 | 136 aa hypothetical protein | |||
42930 | 150 aa hypothetical protein | |||
42940 | 66 aa hypothetical protein | |||
42950 | 152 aa hypothetical protein | |||
42960 | 58 aa hypothetical protein | |||
42970 | 194 aa hypothetical protein | |||
42980 | 409 aa hypothetical protein | |||
42990 | 187 aa hypothetical protein | |||
43000 | 32 aa hypothetical protein | |||
??? | R | AvaORF509P (100% identity) | Ava23ORF42890P | |
43040 | 198 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
6810 | 194 aa hypothetical protein | |||
6820 | M | M.AvaVIII (100% identity) | CGATCG | M.Ava23ORF6820P |
6830 | 321 aa hypothetical protein | |||
20510 | transposase | |||
20520 | R | AvrORFCP (96% identity) | CYCGRG | Ava23ORF20530P |
20530 | M | M.AvaI (100% identity) | CYCGRG | M.Ava23ORF20530P |
20540 | glucanase | |||
21190 | 382 aa hypothetical protein | |||
??? | M | M.Ava27893ORF2370P (100% identity) | M.Ava23ORF21200P | |
21220 | 269 aa hypothetical protein | |||
25960 | 481 aa hypothetical protein | |||
25970 | M | M.AvaIX (100% identity) | RCCGGY | M.Ava23ORF25970P |
25980 | deoxyribose-phosphate aldolase | |||
28220 | 85 aa hypothetical protein | |||
28230 | R | AvaIII (100% identity) | ATGCAT | Ava23ORF28240P |
28240 | M | M.AvaIII (100% identity) | ATGCAT | M.Ava23ORF28240P |
28250 | 820 aa hypothetical protein | |||
32240 | 162 aa hypothetical protein | |||
32250 | M | M.AvaIVP (100% identity) | M.Ava23ORF32250P | |
32260 | R | restriction endonuclease | Ava23ORF32250AP | |
32270 | transposase | |||
32280 | transposase | |||
32290 | R | AvaIVBP (100% identity) | Ava23ORF32250BP | |
32300 | 118 aa hypothetical protein | |||
33250 | 156 aa hypothetical protein | |||
33260 | R | NspMS1ORF28450P (79% identity) | Ava23ORF33260P | |
33270 | 532 aa hypothetical protein | |||
33270 | 532 aa hypothetical protein | |||
33280 | M | M.Ava27893DndCP (100% identity) | M.Ava23DndCP | |
33290 | 80 aa hypothetical protein | |||
33300 | 84 aa hypothetical protein | |||
33310 | M | M.Ava27893DndDP (100% identity) | M.Ava23DndDP | |
33320 | 80 aa hypothetical protein | |||
33330 | 115 aa hypothetical protein | |||
33340 | M | M.Ava27893DndEP (100% identity) | M.Ava23DndEP | |
33350 | iron(III) dicitrate-binding periplasmic protein | |||
38440 | 95 aa hypothetical protein | |||
38450 | M | M.AvaVI (100% identity) | GATC | M.Ava23ORF38450P |
38460 | 68 aa hypothetical protein | |||
47290 | 342 aa hypothetical protein | |||
??? | R | AvaII (100% identity) | GGWCC | Ava23ORF47310P |
47310 | M | M.AvaII (100% identity) | GGWCC | M.Ava23ORF47310P |
47320 | 103 aa hypothetical protein | |||
49500 | 240 aa hypothetical protein | |||
49510 | M | M.AvaVII (100% identity) | GGCC | M.Ava23ORF49510P |
49520 | anthranilate phosphoribosyltransferase | |||
50890 | 70 aa hypothetical protein | |||
50900 | M | M.Tva0441ORF20815P (98% identity) | M.Ava23ORF50900P | |
50910 | cyanate lyase | |||
plasmid plasmid1 | ||||
56540 | 130 aa hypothetical protein | |||
56550 | M | M.AvaORF7369P (100% identity) | M.Ava23ORF56550P | |
56560 | 164 aa hypothetical protein | |||
57500 | 79 aa hypothetical protein | |||
57510 | M | M.AvaV (100% identity) | GATC | M.Ava23ORF57510P |
57520 | 409 aa hypothetical protein | |||
57560 | 130 aa hypothetical protein | |||
57570 | M | M.AvaORF7270P (100% identity) | M.Ava23ORF57570P | |
57580 | 158 aa hypothetical protein | |||
plasmid plasmid3 | ||||
60870 | 1204 aa hypothetical protein | |||
60880 | RM | Aci21ORF57570P (85% identity) | Ava23ORF60880P | |
60890 | alkaline phosphatase domain-containing protein | |||
61050 | 65 aa hypothetical protein | |||
61060 | M | M.Ava27893ORFRP (100% identity) | M.Ava23ORF61060P | |
61070 | 269 aa hypothetical protein | |||
61100 | 130 aa hypothetical protein | |||
61110 | M | M.Ava27893ORFSP (99% identity) | M.Ava23ORF61110P | |
61120 | 165 aa hypothetical protein | |||
plasmid plasmid4 | ||||
63110 | 85 aa hypothetical protein | |||
63120 | R | Nsp2111ORF67410P (98% identity) | Ava23ORF63120P | |
63130 | 283 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
plasmid plasmid1 | ||||
55090 | 706 aa hypothetical protein | |||
55100 | R | AvaMrrP (100% identity) | Ava23MrrP | |
55110 | 855 aa hypothetical protein | |||
plasmid plasmid3 | ||||
61920 | 252 aa hypothetical protein | |||
61930 | R | Tva0441MrrP (96% identity) | Ava23Mrr2P | |
61940 | TPR repeat-containing protein |