Calothrix brevissima NIES-22 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Calothrix brevissima NIES-22 RM systems
Ref: Hirose,Y. et al. unpublished
REBASE ref # 24728
| Sequence length: | GenBank #: | |
| Chromosome: | 8,527,291 bp | AP018207 |
| plasmid plasmid1: | 157,982 bp | AP018208 |
| plasmid plasmid2: | 207,970 bp | AP018209 |
| plasmid plasmid3: | 33,326 bp | AP018210 |
REBASE acronym: Cbr22
Org_num: 24882
All begin NIES22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12490 | 109 aa hypothetical protein | |||
| 12500 | M | M.Ncf36ORF7080P (66% identity) | M.Cbr22ORF12500P | |
| 12510 | 76 aa hypothetical protein | |||
| 12520 | 124 aa hypothetical protein | |||
| 12530 | R | Tsp7910ORF8480P (95% identity) | Cbr22ORF12500P | |
| 12540 | 176 aa hypothetical protein | |||
| 33360 | 85 aa hypothetical protein | |||
| 33370 | M | M.Nsp596ORF12535P (91% identity) | M.Cbr22ORF33370P | |
| 33380 | S | S.TspITDORF2163P (16% identity) | S.Cbr22ORF33370P | |
| 33390 | 161 aa hypothetical protein | |||
| 38100 | 224 aa hypothetical protein | |||
| 38110 | R | Nsp210ORF12705P (94% identity) | Cbr22ORF38190P | |
| 38120 | 125 aa hypothetical protein | |||
| 38130 | 75 aa hypothetical protein | |||
| 38140 | 32 aa hypothetical protein | |||
| 38150 | 348 aa hypothetical protein | |||
| 38160 | S | S.SspHK05ORF64450P (61% identity) | S.Cbr22ORF38190P | |
| 38170 | 84 aa hypothetical protein | |||
| 38180 | 69 aa hypothetical protein | |||
| 38190 | M | M.Ncy582ORF4820P (95% identity) | M.Cbr22ORF38190P | |
| 38210 | lipoyl synthase | |||
| 53140 | 342 aa hypothetical protein | |||
| 53150 | R | Nca2107ORF11700P (92% identity) | Cbr22ORF53230P | |
| 53160 | 227 aa hypothetical protein | |||
| 53170 | addiction module antidote protein, | |||
| 53180 | 81 aa hypothetical protein | |||
| 53190 | 118 aa hypothetical protein | |||
| 53200 | S | S.Atu6N2ORF28P (44% identity) | S.Cbr22ORF53230P | |
| 53210 | 138 aa hypothetical protein | |||
| 53220 | 314 aa hypothetical protein | |||
| 53230 | M | M.Nca2107ORF11700P (91% identity) | M.Cbr22ORF53230P | |
| 53240 | 80 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3760 | D-alanine--D-alanine ligase | |||
| 3770 | M | M.Csp2098ORF20850P (84% identity) | M.Cbr22ORF3770P | |
| 3780 | 289 aa hypothetical protein | |||
| 8790 | 64 aa hypothetical protein | |||
| 8800 | M | M.Csp2100ORF1400P (89% identity) | M.Cbr22ORF8800P | |
| 8810 | cyanate hydratase | |||
| 9330 | glyoxalase/bleomycin resistance | |||
| 9340 | M | M.Hsp220ORF26800P (78% identity) | M.Cbr22ORF9340P | |
| 9350 | ABC transporter-related protein | |||
| 11890 | 191 aa hypothetical protein | |||
| 11900 | M | M.DspB1220ORF19440P (77% identity) | M.Cbr22ORF11900P | |
| 11910 | R | Lsp6406IIIP (67% identity) | Cbr22ORF11900P | |
| 11920 | Fe-S metabolism associated SufE | |||
| 19990 | deoxyribose-phosphate aldolase | |||
| 20000 | M | M.Csp2100ORF15470P (83% identity) | M.Cbr22ORF20000P | |
| 20010 | 33 aa hypothetical protein | |||
| 20570 | 493 aa hypothetical protein | |||
| 20580 | M | M.Ncf36ORF31320P (87% identity) | M.Cbr22ORF20580P | |
| 20590 | R | Asp7108ORFVP (44% identity) | Cbr22ORF20580P | |
| 20600 | phytoene dehydrogenase | |||
| 21610 | 158 aa hypothetical protein | |||
| 21620 | M | M.Csp2100ORF18400P (89% identity) | M.Cbr22ORF21620P | |
| 21630 | 65 aa hypothetical protein | |||
| 22350 | 74 aa hypothetical protein | |||
| 22360 | M | M.Ncf36ORF38760P (84% identity) | M.Cbr22ORF22360P | |
| 22370 | 84 aa hypothetical protein | |||
| 31450 | 202 aa hypothetical protein | |||
| 31460 | M | M.Tsp7712ORF7180P (90% identity) | M.Cbr22ORF31460P | |
| 31470 | R | Pru82ORF4402P (43% identity) | Cbr22ORF31460P | |
| 31480 | C | C.PagC7805ORF3889P (67% identity) | C.Cbr22ORF31460P | |
| 31490 | serine/threonine protein kinase | |||
| 35760 | 482 aa hypothetical protein | |||
| 35770 | M | M.Tsp7910DndEP (96% identity) | M.Cbr22DndEP | |
| 35780 | type II restriction enzyme NspV homolog | |||
| 35770 | 128 aa hypothetical protein | |||
| 35780 | M | M.Nsp2601ORF16245P (71% identity) | M.Cbr22ORF35780P | |
| 35790 | R | Nsp2601ORF16245P (87% identity) | Cbr22ORF35780P | |
| 35800 | 660 aa hypothetical protein | |||
| 35790 | type II site-specific deoxyribonuclease | |||
| 35800 | M | M.Csp2100DndDP (90% identity) | M.Cbr22DndDP | |
| 35810 | metallopeptidase | |||
| 37260 | SNF2-related helicase | |||
| 37270 | RM | NspNUC1ORF9595P (90% identity) | Cbr22ORF37270P | |
| 37280 | helicase-like protein | |||
| 38850 | 162 aa hypothetical protein | |||
| 38860 | M | M.Csp7507ORF5570P (79% identity) | M.Cbr22ORF38860P | |
| 38870 | RNA-binding S1 domain-containing protein | |||
| 40870 | cyclic nucleotide-binding protein | |||
| 40880 | M | M.Csp2100DndCP (87% identity) | M.Cbr22DndCP | |
| 40890 | 532 aa hypothetical protein | |||
| 40890 | 532 aa hypothetical protein | |||
| 40900 | R | Ava23ORF33260P (68% identity) | Cbr22ORF40900P | |
| 40910 | 156 aa hypothetical protein | |||
| 42130 | Phenazine biosynthesis PhzC/PhzF protein | |||
| 42140 | M | M.Tsp7910ORF6640P (83% identity) | M.Cbr22ORF42140P | |
| 42150 | 145 aa hypothetical protein | |||
| 43990 | 80 aa hypothetical protein | |||
| 44000 | M | M.Nsp5183ORF1824P (88% identity) | M.Cbr22ORF44000P | |
| 44010 | R | NspC057ORF28650P (89% identity) | Cbr22ORF44000P | |
| 44020 | 814 aa hypothetical protein | |||
| 48120 | oxidoreductase domain-containing protein | |||
| 48130 | M | M.Nsp7107ORF781P (85% identity) | M.Cbr22ORF48130P | |
| 48140 | 271 aa hypothetical protein | |||
| plasmid plasmid1 | ||||
| 68320 | 264 aa hypothetical protein | |||
| 68330 | RM | NpuORF91P (48% identity) | Cbr22ORF68330P | |
| 68340 | helicase domain-containing protein | |||
| plasmid plasmid2 | ||||
| 69570 | helicase-like protein | |||
| 69580 | RM | NspNUC1ORF9595P (91% identity) | Cbr22ORF69580P | |
| 69590 | SNF2-related helicase | |||
| plasmid plasmid3 | ||||
| 70460 | 257 aa hypothetical protein | |||
| 70470 | RM | Nsp926ORF31990P (80% identity) | Cbr22ORF70470P | |
| 70480 | 82 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 49190 | integral membrane sensor signal transduction | |||
| 49200 | R | Nsp5183McrCP (70% identity) | Cbr22McrCP | |
| 49210 | R | Tsp7601McrBP (62% identity) | Cbr22McrBP | |
| 49220 | ATPase, BadF/BadG/BcrA/BcrD type | |||