Escherichia coli AR_0055 |
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Putative Escherichia coli AR_0055 RM systems
Ref: Conlan,S. et al. unpublished
REBASE ref # 23638
| Sequence length: | GenBank #: | |
| Chromosome: | 5,141,314 bp | CP021935 |
| plasmid unitig_2: | 138,340 bp | CP021936 |
| plasmid unitig_3j3rc_linear: | 151,110 bp | CP021937 |
| plasmid unitig_4: | 75,318 bp | CP021938 |
REBASE acronym: Eco58
Org_num: 23078
All begin AM434_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15685 | 112 aa hypothetical protein | |||
| 15690 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | Eco58ORF15700P |
| 15695 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.Eco58ORF15700P |
| 15700 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.Eco58ORF15700P |
| 15705 | restriction endonuclease | |||
| 17850 | 52 aa hypothetical protein | |||
| 17855 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco58ORF17860P |
| 17860 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco58ORF17860P |
| 17865 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco58ORF17860P |
| 17870 | 267 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 950 | drug/metabolite exporter YedA | |||
| 955 | V | V.SflC32DcmP (74% identity) | V.Eco58DcmP | |
| 960 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco58DcmP |
| 965 | phosphohydrolase | |||
| 4220 | transcriptional regulator | |||
| 4225 | M | M.EcoST131bORFEP (99% identity) | M.Eco58ORF4225P | |
| 4230 | serine/threonine protein phosphatase | |||
| 8775 | Fis family transcriptional regulator | |||
| 8780 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco58ORF8780P |
| 8785 | transporter | |||
| 9405 | ribulose-phosphate 3-epimerase | |||
| 9410 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco58DamP |
| 9415 | cell division protein DamX | |||
| 15300 | 83 aa hypothetical protein | |||
| 15305 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco58ORF15305P |
| 15310 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco58ORF15305P |
| 15315 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco58ORF15305P |
| 15320 | restriction endonuclease | |||
| 15940 | 164 aa hypothetical protein | |||
| 15945 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco58ORF15945P |
| 15950 | LexA family transcriptional regulator | |||
| 21525 | 71 aa hypothetical protein | |||
| 21530 | M | M.KpnYN1ORFGP (89% identity) | M.Eco58ORF21530P | |
| 21535 | transcriptional regulator | |||
| 23915 | TrmB family transcriptional regulator | |||
| 23920 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco58ORF23920P |
| 23935 | 108 aa hypothetical protein | |||
| plasmid unitig_2 | ||||
| 27460 | 120 aa hypothetical protein | |||
| ??? | M | M.Sma1978ORFAP (100% identity) | M.Eco58ORF27465P | |
| 27470 | 149 aa hypothetical protein | |||
| plasmid unitig_3j3rc_linear | ||||
| 28115 | 0 aa hypothetical protein | |||
| 28120 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco58ORF28120P |
| 28125 | 73 aa hypothetical protein | |||
| plasmid unitig_4 | ||||
| 28710 | 73 aa hypothetical protein | |||
| 28715 | M | M.EcosB2CORFHP (100% identity) | M.Eco58ORF28715P | |
| 28720 | 0 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15315 | restriction endonuclease | |||
| 15320 | R | EcosS9McrCP (100% identity) | Eco58McrCP | |
| 15325 | R | EcosS3McrBP (100% identity) | Eco58McrBP | |
| 15330 | 60 aa hypothetical protein | |||