Thioflexothrix psekupsii D3 |
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Putative Thioflexothrix psekupsii D3 RM systems
Ref: Fomenkov,A. et al. unpublished
REBASE ref # 24166
Contig set: 3,968,255 bp
GenBank #: MSLT00000000 (NZ_MSLT00000000)
REBASE acronym: TpsD3
Org_num: 11156
All begin TPSD3_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16680 | two-component system response regulator | |||
| 16685 | S | S.TpsD3ORF13270P (29% identity) | S.TpsD3ORF16685P | |
| 16690 | 343 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5 | M | M.TpsD3ORF12465P (83% identity) | M.TpsD3ORF5P | |
| 10 | 60 aa hypothetical protein | |||
| 4450 | DNA gyrase subunit B | |||
| 4455 | M | M.TpsD3ORF13670P (52% identity) | M.TpsD3ORF4455P | |
| 4460 | 165 aa hypothetical protein | |||
| 12785 | 103 aa hypothetical protein | |||
| 12790 | RM | S.Cbo27700ORF335P (47% identity) | TpsD3ORF12790P | |
| ??? | type II restriction enzyme | |||
| 12790 | 220 aa hypothetical protein | |||
| ??? | S | S.Fba392ORF14295P (28% identity) | S.TpsD3ORF12800P | |
| 12800 | RM | Mae87ORF37890P (87% identity) | TpsD3ORF12800P | |
| 12805 | 535 aa hypothetical protein | |||
| 5370 | 60 aa hypothetical protein | |||
| 5375 | M | Ble402ORF115P (35% identity) | M.TpsD3ORF5375P | |
| 5380 | 1048 aa hypothetical protein | |||
| 10635 | 150 aa hypothetical protein | |||
| 10640 | modification methylase | |||
| 12460 | 357 aa hypothetical protein | |||
| 12465 | M | M.TpsD3ORF16355P (99% identity) | M.TpsD3ORF12465P | |
| 12470 | 60 aa hypothetical protein | |||
| 11865 | 247 aa hypothetical protein | |||
| ??? | M | M.Hsp26554ORF17595P (37% identity) | M.TpsD3ORF11870BP | |
| 11875 | 343 aa hypothetical protein | |||
| 11880 | M | M.Hsp26554ORF17595P (19% identity) | M.TpsD3ORF11870AP | |
| 11885 | 89 aa hypothetical protein | |||
| 11935 | U32 family peptidase | |||
| 11940 | M | M.Bspy2ORF4515P (71% identity) | RGCGCY | M.TpsD3ORF11940P |
| 11945 | R | Aba17537ORF895P (68% identity) | RGCGCY | TpsD3ORF11940P |
| 11950 | DNA polymerase beta subunit | |||
| 15025 | 292 aa hypothetical protein | |||
| 15030 | M | M.BseY1ORF22890P (52% identity) | M.TpsD3ORF15030P | |
| 15035 | 73 aa hypothetical protein | |||
| 7675 | 64 aa hypothetical protein | |||
| 7680 | R | LspO77ORF2337P (74% identity) | TpsD3ORF7685P | |
| 7685 | M | M.Tli06511ORF369P (54% identity) | M.TpsD3ORF7685P | |
| 7690 | 1094 aa hypothetical protein | |||
| 15105 | acetolactate synthase, large subunit, | |||
| 15110 | RM | TpsD3ORF15115P (90% identity) | TpsD3ORF15110P | |
| 15115 | 1058 aa hypothetical protein | |||
| 15110 | 1057 aa hypothetical protein | |||
| 15115 | RM | TpsD3ORF15110P (90% identity) | TpsD3ORF15115P | |
| 15120 | 96 aa hypothetical protein | |||
| 3905 | 324 aa hypothetical protein | |||
| 3910 | M | M.Dli5ac10ORF43220P (66% identity) | M.TpsD3ORF3910P | |
| 3915 | 356 aa hypothetical protein | |||
| 4055 | recombinase RecF | |||
| 4060 | RM | Ble402ORF7045P (72% identity) | TpsD3ORF4060P | |
| 4065 | 194 aa hypothetical protein | |||
| 8565 | uracil-DNA glycosylase | |||
| 8570 | M | M.TpsD3ORF13670P (44% identity) | M.TpsD3ORF8570P | |
| 8575 | 900 aa hypothetical protein | |||
| 16185 | 0 aa hypothetical protein | |||
| ??? | R | CthGBORF2493P (65% identity) | ATGCAT | TpsD3ORF16195P |
| 16195 | M | M.CthGBORF2493P (71% identity) | ATGCAT | M.TpsD3ORF16195P |
| 16200 | molybdenum ABC transporter ATP-binding protein | |||
| 16350 | 73 aa hypothetical protein | |||
| 16355 | M | M.TpsD3ORF12465P (99% identity) | M.TpsD3ORF16355P | |
| 16360 | 60 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13665 | 73 aa hypothetical protein | |||
| ??? | M | M.Ble402ORF12770AP (38% identity) | M.TpsD3ORF13670P | |
| 13675 | 163 aa hypothetical protein | |||