Escherichia coli EC1515 |
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Putative Escherichia coli EC1515 RM systems
Ref: Kao,C.-Y. et al. unpublished
REBASE ref # 24691
| Sequence length: | GenBank #: | |
| Chromosome: | 5,167,363 bp | CP021844 |
| plasmid pEC1515-1: | 125,099 bp | CP021845 |
| plasmid pEC1515-3: | 84,091 bp | CP021847 |
REBASE acronym: Eco1515
Org_num: 24767
All begin CDH89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20210 | 50S ribosome-binding GTPase | |||
| 20215 | M | M.EcoEC7518ORF18420P (100% identity) | M.Eco1515ORF20215P | |
| 20220 | S | restriction endonuclease subunit S | S.Eco1515ORF20215P | |
| 20225 | IS1 family transposase | |||
| 22300 | DUF262 domain-containing protein | |||
| 22305 | R | EcoHEC0005ORF11960P (100% identity) | Eco1515ORF22310P | |
| 22310 | M | M.EcoHEC0005ORF11960P (100% identity) | M.Eco1515ORF22310P | |
| 22315 | S | S.EcoHEC0005ORF11960P (100% identity) | S.Eco1515ORF22310P | |
| 22320 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2010 | protein DamX | |||
| 2015 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1515DamP |
| 2020 | ribulose-phosphate 3-epimerase | |||
| 2560 | transporter | |||
| 2565 | M | M.Eco974ORF4725P (100% identity) | ATGCAT | M.Eco1515ORF2565P |
| 2570 | Fis family transcriptional regulator | |||
| 4340 | TIGR02687 family protein | |||
| 4345 | RM | Eco974ORF2950P (100% identity) | Eco1515ORF4345P | |
| 4350 | DNA repair protein | |||
| 6395 | 164 aa hypothetical protein | |||
| 6400 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco1515ORF6400P |
| 6405 | LexA family transcriptional regulator | |||
| 8150 | 146 aa hypothetical protein | |||
| 8155 | M | M.EcoYSP81ORFGP (96% identity) | GATC | M.Eco1515ORF8155P |
| 8160 | NinE family protein | |||
| 10780 | phosphohydrolase | |||
| 10785 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.Eco1515DcmP |
| 10790 | V | V.SsoSE61DcmP (100% identity) | V.Eco1515DcmP | |
| 10795 | EamA family transporter | |||
| 22570 | RM | EcoRG065ORF11725P (100% identity) | Eco1515ORF22570P | |
| 22575 | ATP-dependent helicase | |||
| plasmid pEC1515-1 | ||||
| 26410 | 73 aa hypothetical protein | |||
| 26415 | M | M.SspPIBORF23080P (100% identity) | M.Eco1515ORF26415P | |
| 26420 | 0 aa hypothetical protein | |||
| plasmid pEC1515-3 | ||||
| 27685 | 59 aa hypothetical protein | |||
| 27690 | M | M.Ecos69ORF26765P (100% identity) | M.Eco1515ORF27690P | |
| 27695 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20350 | IS5/IS1182 family transposase | |||
| 20355 | R | SflN97McrCP (100% identity) | Eco1515McrCP | |
| 20360 | R | SflN97McrBP (100% identity) | Eco1515McrBP | |
| 20365 | 75 aa hypothetical protein | |||