Escherichia coli |
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Putative Escherichia coli RM systems
Ref: Yu,C. et al. unpublished
REBASE ref # 28529
| Sequence length: | GenBank #: | |
| chromosome VREC0761: | 4,975,029 bp | LR536430 |
| chromosome VREC0864: | 5,114,416 bp | LR536431 |
REBASE acronym:
Org_num:
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome VREC0761 | ||||
| ??? | M | M.Kpn87729ORFAP (98% identity) | M.Eco761ORFCP | |
| ??? | S | S.Eco304CCORF26430P (98% identity) | S.Eco761ORFCP | |
| ??? | R | KpnS1322ORF26085P (99% identity) | Eco761ORFCP | |
| chromosome VREC0864 | ||||
| ??? | M | M.SenS12VPHORF19925P (99% identity) | M.Ecod6c8ORFFP | |
| ??? | S | S.EkoDW108ORF4675P (99% identity) | S.Ecod6c8ORFFP | |
| ??? | R | Sen25333ORF16070P (99% identity) | Ecod6c8ORFFP | |
| ??? | M | M.EcoEC0456ORF12300P (100% identity) | M.Ecod6c8ORFCP | |
| ??? | S | S.EcoEC0456ORF12300P (100% identity) | S.Ecod6c8ORFCP | |
| ??? | R | EcoEC0456ORF12300P (100% identity) | Ecod6c8ORFCP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome VREC0761 | ||||
| ??? | M | M.Eco15ORF12047P (99% identity) | M.Eco761ORFAP | |
| ??? | V | V.Sso8361DcmP (100% identity) | V.Eco761DcmP | |
| ??? | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco761DcmP |
| ??? | M | M.EcoPO3ORF2605P (100% identity) | ATGCAT | M.Eco761ORFDP |
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.Eco761DamP |
| ??? | M | M.Kgr634ORF26125P (100% identity) | M.Eco761ORFEP | |
| ??? | M | M.EcoNIH4ORF11555P (100% identity) | GATC | M.Eco761ORFFP |
| chromosome VREC0864 | ||||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Ecod6c8DamP |
| ??? | M | M.EcoW06E18ORF17895P (100% identity) | ATGCAT | M.Ecod6c8ORFAP |
| ??? | M | M.Ecos135DcmP (100% identity) | CCWGG | M.Ecod6c8DcmP |
| ??? | V | V.Eco16309DcmP (99% identity) | V.Ecod6c8DcmP | |
| ??? | M | M.Sfl9783ORF5079P (99% identity) | M.Ecod6c8ORFDP | |
| ??? | M | M.Sbo812ORFAP (100% identity) | M.Ecod6c8ORFBP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome VREC0761 | ||||
| ??? | M | M.KquC3001ORF9710P (100% identity) | CCGAG | M.Eco761ORFBP |
| ??? | R | Csp887ORF10110P (100% identity) | CCGAG | Eco761ORFBP |
| ??? | M | M.Eco65MSORFAP (100% identity) | M.Eco761ORFGP | |
| ??? | R | Eco531ORFAP (100% identity) | Eco761ORFGP | |
| chromosome VREC0864 | ||||
| ??? | R | KpnFF72ORF8750P (99% identity) | Ecod6c8ORFEP | |
| ??? | M | site-specific DNA-methyltransferase | M.Ecod6c8ORFEBP | |
| ??? | M | M.KquC3001ORF9710P (78% identity) | M.Ecod6c8ORFEAP | |