Escherichia coli SE15 |
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Putative Escherichia coli SE15 RM systems
Ref: Toh,H. et al. J. Bacteriol. 192 (4), 1165-1166 (2010)
REBASE ref # 11466
| Sequence length: | GenBank #: | |
| Chromosome: | 4,717,338 bp | AP009378 |
| plasmid pECSF1: | 122,345 bp | AP009379 (NC_013655) |
REBASE acronym: EcoSE15
Org_num: 5735
All begin ECSF_, ECSF_P1-
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 247 | 217 aa conserved hypothetical protein | |||
| 248 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoSE15ORF249P |
| 249 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoSE15ORF249P |
| 250 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoSE15ORF249P |
| 251 | 267 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | 306 aa conserved hypothetical protein | |||
| 1811 | V | V.SflC32DcmP (74% identity) | V.EcoSE15DcmP | |
| 1812 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoSE15DcmP |
| 1813 | 231 aa conserved hypothetical protein | |||
| 3093 | DNA-binding protein | |||
| 3094 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoSE15ORF3094P |
| 3095 | 68 aa conserved hypothetical protein | |||
| 3207 | D-ribulose-5-phosphate 3-epimerase | |||
| 3208 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSE15DamP |
| 3209 | 428 aa conserved hypothetical protein | |||
| 4164 | histidin kinase-like protein | |||
| 4165 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoSE15ORF4165P |
| 4166 | transposase | |||
| 4215 | transposase | |||
| 4216 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoSE15ORF4216P |
| 4217 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoSE15ORF4216P |
| 4218 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoSE15ORF4216P |
| 4219 | 428 aa conserved hypothetical protein | |||
| plasmid pECSF1 | ||||
| 134 | 103 aa conserved hypothetical protein | |||
| 135 | M | M.Sfl0030ORFCP (100% identity) | M.EcoSE15ORF135P | |
| 136 | 73 aa conserved hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4218 | restriction endonuclease | |||
| 4219 | R | EcosS9McrCP (100% identity) | EcoSE15McrCP | |
| 4220 | R | EcosS3McrBP (100% identity) | EcoSE15McrBP | |
| 4221 | 60 aa hypothetical protein | |||