Escherichia coli AR_0149 |
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Putative Escherichia coli AR_0149 RM systems
Ref: Conlan,S. et al. unpublished
REBASE ref # 23638
| Sequence length: | GenBank #: | |
| Chromosome: | 5,029,162 bp | CP021535 |
| Chromosome: | 4,830,167 bp | CP021532 |
| plasmid tig00000220: | 48,528 bp | CP021533 |
| plasmid unitig_2: | 244,955 bp | CP021536 |
| plasmid unitig_3: | 97,474 bp | CP021537 |
| plasmid unitig_4: | 64,372 bp | CP021538 |
REBASE acronym: Eco119
Org_num: 24682
All begin AM366_, AM396_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24370 | 322 aa hypothetical protein | |||
| 24375 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco119IP |
| 24380 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco119I |
| ??? | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco119I |
| 24395 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4355 | cell division protein DamX | |||
| 4360 | M | DNA adenine methylase | GATC | M.Eco119DamP |
| 4365 | ribulose-phosphate 3-epimerase | |||
| 4915 | transporter | |||
| 4920 | M | M.EcoTH9F11ORF2180P (100% identity) | ATGCAT | M.Eco119ORF4920P |
| 4925 | Fis family transcriptional regulator | |||
| 8770 | 59 aa hypothetical protein | |||
| 8775 | M | M.Xca80ORFEP (100% identity) | M.Eco119ORF8775P | |
| 8780 | 73 aa hypothetical protein | |||
| 12735 | phosphohydrolase | |||
| 12740 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco119Dcm |
| 12745 | V | V.EcoTH9F11DcmP (100% identity) | CCWGG | V.Eco119DcmP |
| 12750 | drug/metabolite exporter YedA | |||
| Chromosome | ||||
| 6755 | integrase | |||
| 6760 | M | M.Ecos164ORF17830P (100% identity) | GGTACC | M.Eco0149I |
| 6765 | 568 aa hypothetical protein | |||
| 16030 | drug/metabolite exporter YedA | |||
| 16035 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco0149DcmP |
| 16040 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco0149Dcm |
| 16045 | phosphohydrolase | |||
| 23470 | Fis family transcriptional regulator | |||
| 23475 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco0149ORF23475P |
| 23480 | IS5/IS1182 family transposase | |||
| 24120 | ribulose-phosphate 3-epimerase | |||
| 24125 | M | DNA adenine methylase | GATC | M.Eco0149DamP |
| 24130 | protein DamX | |||
| plasmid tig00000220 | ||||
| 24750 | 73 aa hypothetical protein | |||
| 24755 | M | M.Ssp14523ORF22990P (100% identity) | M.Eco0149ORF24755P | |
| 24760 | 0 aa hypothetical protein | |||
| plasmid unitig_2 | ||||
| 26420 | CopG family transcriptional regulator | |||
| 26425 | M | M.SfrTF18ORF14295P (100% identity) | M.Eco119ORF26425P | |
| 26430 | endonuclease III | |||
| 26900 | 120 aa hypothetical protein | |||
| ??? | M | M.Sma1978ORFAP (100% identity) | M.Eco119ORF26905P | |
| 26910 | 149 aa hypothetical protein | |||
| 27600 | 73 aa hypothetical protein | |||
| 27605 | M | M.Sfl60ORF25670P (100% identity) | SAY | M.Eco119ORF27605P |
| 27610 | 0 aa hypothetical protein | |||
| plasmid unitig_3 | ||||
| 28180 | recombination-associated protein RdgC | |||
| 28185 | M | M.EcoDEC12AORF5457P (100% identity) | M.Eco119ORF28185P | |
| 28190 | glutamine--tRNA ligase | |||
| plasmid unitig_4 | ||||
| 28540 | 59 aa hypothetical protein | |||
| 28545 | R | Kpn0066ORF26785P (99% identity) | Eco119ORF28550P | |
| 28550 | M | M.Ecl038ORF5101P (100% identity) | M.Eco119ORF28550P | |
| 28555 | serine recombinase | |||
| 28875 | 74 aa hypothetical protein | |||
| 28880 | M | M.Mmo438ORF470P (100% identity) | M.Eco119ORF28880P | |
| 28890 | 66 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6850 | peptidase S8 | |||
| 6855 | M | M.Ecos164ORF17750P (100% identity) | ACCACC | M.Eco0149II |
| 6860 | R | Ecos164ORF17750P (100% identity) | ACCACC | Eco0149IIP |
| 6865 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24795 | restriction endonuclease | |||
| 24800 | R | SflN101McrBP (100% identity) | Eco119McrBP | |
| 24805 | R | SflN101McrCP (100% identity) | Eco119McrCP | |
| 24810 | 128 aa hypothetical protein | |||
| Chromosome | ||||
| 6910 | 0 aa hypothetical protein | |||
| 6915 | R | SflN97McrCP (100% identity) | Eco0149McrCP | |
| 6920 | R | Ecos164McrBP (100% identity) | Eco0149McrBP | |
| 6925 | 75 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1215 | 59 aa hypothetical protein | |||
| 1220 | M | M.Eco0128ORF2340P (99% identity) | M.Eco119ORF1220P | |
| 1225 | 70 aa hypothetical protein | |||