Histophilus somni USDA-ARS-USMARC-63373 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Histophilus somni USDA-ARS-USMARC-63373 RM systems
Ref: Harhay,G.P. et al. unpublished
REBASE ref # 21226
Complete sequence: 2,110,610 bp
GenBank #: CP018807
REBASE acronym: Hso63373
Org_num: 24480
All begin BTV22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4630 | 284 aa hypothetical protein | |||
| 4635 | M | M.HsoF09ORF5440P (100% identity) | CYYANNNNNNCTC | M.Hso63373II |
| 4640 | addiction module protein | |||
| 4645 | S | S.HsoATR08ORF4720P (100% identity) | CYYANNNNNNCTC | S.Hso63373II |
| 4650 | 174 aa hypothetical protein | |||
| 4655 | R | HsoMASF01ORF5515P (100% identity) | CYYANNNNNNCTC | Hso63373IIP |
| 4660 | exodeoxyribonuclease I | |||
| 5965 | restriction endonuclease subunit M | |||
| 5970 | R | Hso63374IP (100% identity) | GATTNNNNNGTT | Hso63373IP |
| 5975 | 326 aa hypothetical protein | |||
| 5980 | S | S.HsoATR07ORF6020P (100% identity) | GATTNNNNNGTT | S.Hso63373I |
| 5985 | cell filamentation protein Fic | |||
| 5990 | M | M.HsoATR07ORF6020P (100% identity) | GATTNNNNNGTT | M.Hso63373I |
| 5995 | 160 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 835 | D-glycero-beta-D-manno-heptose-1,7-bisphosphate | |||
| 840 | S | S.HsoF09ORF9270P (100% identity) | CGANNNNNRTAY | S.Hso63373III |
| 845 | RM | HsoF09ORF9270P (100% identity) | CGANNNNNRTAY | Hso63373III |
| 850 | transcriptional regulator | |||
| 1690 | HrgA protein | |||
| 1695 | RM | HsoF011ORF8380P (100% identity) | Hso63373ORF1695P | |
| 1700 | ionic transporter y4hA | |||
| 2140 | site-specific integrase | |||
| 2145 | C | C.HsoMASF01ORF8025P (100% identity) | C.Hso63373ORF2150P | |
| 2150 | M | M.HsoKLM014ORF8080P (100% identity) | M.Hso63373ORF2150P | |
| 2155 | R | HsoKLM014ORF8080P (100% identity) | Hso63373ORF2150P | |
| 2160 | V | V.HsoMASF01ORF8025P (100% identity) | V.Hso63373ORF2150P | |
| 2165 | 302 aa hypothetical protein | |||
| 2500 | restriction endonuclease | |||
| 2505 | M | M.HsoF09ORF7580P (100% identity) | GAWTC | M.Hso63373IV |
| 2510 | valine--tRNA ligase | |||
| 3435 | UTP--glucose-1-phosphate uridylyltransferase | |||
| 3440 | M | M.HsoF09ORF6645P (100% identity) | GATC | M.Hso63373V |
| 3445 | 3-dehydroquinate synthase | |||
| 7585 | 208 aa hypothetical protein | |||
| 7590 | M | M.HsoF09ORF2030P (100% identity) | M.Hso63373ORF7590P | |
| 7595 | replication protein P | |||
| 7720 | 242 aa hypothetical protein | |||
| 7725 | M | M.HsoMASF01ORF1910P (100% identity) | M.Hso63373ORF7725P | |
| 7730 | 264 aa hypothetical protein | |||