Lactobacillus salivarius ZLS006 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lactobacillus salivarius ZLS006 RM systems
Ref: Zhang,D. unpublished
REBASE ref # 22493
| Sequence length: | GenBank #: | |
| Chromosome: | 1,893,327 bp | CP020858 |
| plasmid unnamed1: | 264,403 bp | CP020859 |
REBASE acronym: Lsa006
Org_num: 24524
All begin B7R82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2385 | XRE family transcriptional regulator | |||
| 2390 | R | Lsa1046ORF1342P (99% identity) | Lsa006ORF2395P | |
| 2395 | M | M.Lsa1046ORF1342P (98% identity) | M.Lsa006ORF2395P | |
| 2400 | S | S.Lsa1046ORF1342P (99% identity) | S.Lsa006ORF2395P | |
| 2405 | 424 aa hypothetical protein | |||
| 4390 | 78 aa hypothetical protein | |||
| 4395 | R | LsaBNS11ORF475P (100% identity) | Lsa006ORF4400P | |
| 4400 | M | M.LsaBNS11ORF475P (100% identity) | M.Lsa006ORF4400P | |
| 4405 | S | S3.LsaRenORF869P (58% identity) | S1.Lsa006ORF4400P | |
| 4410 | site-specific integrase | |||
| 4415 | S | S.LsaSORF916P (98% identity) | S2.Lsa006ORF4400P | |
| 4420 | S | S.LsaSORF915P (51% identity) | S3.Lsa006ORF4400P | |
| ??? | S | Type I restriction-modification system specificity subunit | S4.Lsa006ORF4400P | |
| 4425 | S | S.LsaSORF917P (37% identity) | S5.Lsa006ORF4400P | |
| 4430 | PTS sugar transporter subunit IIBC | |||
| 8445 | recombinase XerD | |||
| 8450 | M | M.Lsacp400ORF1801P (100% identity) | M.Lsa006ORF8450P | |
| 8455 | S | S.LsaBNS11ORF4585P (67% identity) | S.Lsa006ORF8450P | |
| 8460 | R | Lsacp400ORF1801P (100% identity) | Lsa006ORF8450P | |
| 8465 | restriction endonuclease subunit M | |||
| plasmid unnamed1 | ||||
| 9560 | 58 aa hypothetical protein | |||
| 9565 | S | S.LsaSNK6ORF8335P (99% identity) | S.Lsa006ORF9565P | |
| 9570 | toxin PIN | |||
| 9800 | 66 aa hypothetical protein | |||
| 9805 | R | Lsa2DORF9550P (99% identity) | Lsa006ORF9830P | |
| 9810 | S | S1.LsaRenORF1788P (56% identity) | S1.Lsa006ORF9830P | |
| 9815 | integrase | |||
| 9820 | S | S1.Lsa840ORF1791P (50% identity) | S2.Lsa006ORF9830P | |
| 9825 | S | S3.Lsa840ORF1791P (99% identity) | S3.Lsa006ORF9830P | |
| 9830 | M | M1.Lsa840ORF1791P (99% identity) | M1.Lsa006ORF9830P | |
| 9835 | M | M1.LsaBNS11ORF9930P (97% identity) | M2.Lsa006ORF9830P | |
| 9840 | S | S4.LsaGJ24ORF1681P (98% identity) | S4.Lsa006ORF9830P | |
| 9845 | 349 aa hypothetical protein | |||
| 10465 | site-specific integrase | |||
| 10470 | S | S.LsaH1ORF770P (100% identity) | S.Lsa006ORF10475P | |
| 10475 | M | M.Lsacp400ORF14131P (97% identity) | M.Lsa006ORF10475P | |
| 10480 | 80 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2300 | 210 aa hypothetical protein | |||
| 2305 | M | M.PacJQII5ORF7555P (99% identity) | M.Lsa006ORF2305P | |
| 2310 | terminase | |||
| 6375 | 91 aa hypothetical protein | |||
| 6380 | M | M.LsaBNS11ORF2435P (98% identity) | M.Lsa006ORF6380P | |
| 6385 | 208 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed1 | ||||
| 10480 | 80 aa hypothetical protein | |||
| 10485 | M | M2.Lsa3154ORF42P (94% identity) | M1.Lsa006ORF10485P | |
| 10490 | M | M3.LsaSORF1758eP (90% identity) | M2.Lsa006ORF10485P | |
| 10495 | M | M1.Lsa3154ORF42P (96% identity) | M3.Lsa006ORF10485P | |
| 10500 | R | LsaSORF1758eP (97% identity) | Lsa006ORF10485P | |
| 10505 | 1060 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1630 | protein-tyrosine-phosphatase | |||
| 1635 | R | LsaBNS11ORF7060P (99% identity) | Lsa006ORF1635P | |
| 1640 | IMP dehydrogenase | |||
| 2405 | 424 aa hypothetical protein | |||
| ??? | R | Lsa1046MrrP (100% identity) | Lsa006MrrP | |
| 2415 | 109 aa hypothetical protein | |||