Ref: Zhang,D. unpublished

REBASE ref # 22493

Sequence length:GenBank #:
Chromosome: 1,893,327 bp CP020858
plasmid unnamed1: 264,403 bp CP020859

REBASE acronym: Lsa006

Org_num: 24524

 

All begin B7R82_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
2385 XRE family transcriptional regulator
2390 R Lsa1046ORF1342P (99% identity) Lsa006ORF2395P
2395 M M.Lsa1046ORF1342P (98% identity) M.Lsa006ORF2395P
2400 S S.Lsa1046ORF1342P (99% identity) S.Lsa006ORF2395P
2405 424 aa hypothetical protein
 
4390 78 aa hypothetical protein
4395 R LsaBNS11ORF475P (100% identity) Lsa006ORF4400P
4400 M M.LsaBNS11ORF475P (100% identity) M.Lsa006ORF4400P
4405 S S3.LsaRenORF869P (58% identity) S1.Lsa006ORF4400P
4410 site-specific integrase
4415 S S.LsaSORF916P (98% identity) S2.Lsa006ORF4400P
4420 S S.LsaSORF915P (51% identity) S3.Lsa006ORF4400P
??? S Type I restriction-modification system specificity subunit S4.Lsa006ORF4400P
4425 S S.LsaSORF917P (37% identity) S5.Lsa006ORF4400P
4430 PTS sugar transporter subunit IIBC
 
8445 recombinase XerD
8450 M M.Lsacp400ORF1801P (100% identity) M.Lsa006ORF8450P
8455 S S.LsaBNS11ORF4585P (67% identity) S.Lsa006ORF8450P
8460 R Lsacp400ORF1801P (100% identity) Lsa006ORF8450P
8465 restriction endonuclease subunit M
 
plasmid unnamed1
 
9560 58 aa hypothetical protein
9565 S S.LsaSNK6ORF8335P (99% identity) S.Lsa006ORF9565P
9570 toxin PIN
 
9800 0 aa hypothetical protein
9805 R Lsa2DORF9550P (99% identity) Lsa006ORF9830P
9810 S S1.LsaRenORF1788P (56% identity) S1.Lsa006ORF9830P
9815 integrase
9820 S S1.Lsa840ORF1791P (50% identity) S2.Lsa006ORF9830P
9825 S S3.Lsa840ORF1791P (99% identity) S3.Lsa006ORF9830P
9830 M M1.Lsa840ORF1791P (99% identity) M1.Lsa006ORF9830P
9835 M M1.LsaBNS11ORF9930P (97% identity) M2.Lsa006ORF9830P
9840 S S4.LsaGJ24ORF1681P (98% identity) S4.Lsa006ORF9830P
9845 349 aa hypothetical protein
 
10465 site-specific integrase
10470 S S.Lsa1046ORF2047P (100% identity) S.Lsa006ORF10475P
10475 M M.Lsacp400ORF14131P (97% identity) M.Lsa006ORF10475P
10480 80 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
2300 210 aa hypothetical protein
2305 M M.PacJQII5ORF7555P (99% identity) M.Lsa006ORF2305P
2310 terminase
 
6375 91 aa hypothetical protein
6380 M M.LsaBNS11ORF2435P (98% identity) M.Lsa006ORF6380P
6385 208 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
plasmid unnamed1
 
10480 80 aa hypothetical protein
10485 M M2.Lsa3154ORF42P (94% identity) M1.Lsa006ORF10485P
10490 M M3.LsaSORF1758eP (90% identity) M2.Lsa006ORF10485P
10495 M M1.Lsa3154ORF42P (96% identity) M3.Lsa006ORF10485P
10500 R LsaSORF1758eP (97% identity) Lsa006ORF10485P
10505 1060 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
1630 protein-tyrosine-phosphatase
1635 R LsaBNS11ORF7060P (99% identity) Lsa006ORF1635P
1640 IMP dehydrogenase
 
2405 424 aa hypothetical protein
??? R Lsa1046MrrP (100% identity) Lsa006MrrP
2415 109 aa hypothetical protein