Acidaminococcus fermentans DSM 20731 |
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Putative Acidaminococcus fermentans DSM 20731 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14256
Complete sequence: 2,329,769 bp
GenBank #: CP001859 (NC_013740)
REBASE acronym: Afe20731
Org_num: 5744
All begin Acfer_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1157 | 51 aa hypothetical protein | |||
| 1158 | R | DEAD/DEAH box helicase | Afe20731ORF1158P | |
| 1159 | transposase | |||
| 1172 | integrase family protein | |||
| ??? | R | Afe1571ORF8300P (63% identity) | Afe20731ORF1176P | |
| 1174 | S | Afe20731ORF1176P (10% identity) | S.Afe20731ORF1176P | |
| 1176 | M | M.Afe1571ORF8300P (100% identity) | M.Afe20731ORF1176P | |
| 1177 | transcriptional regulator, AsnC family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1079 | virulence-related protein | |||
| 1080 | M | M.Afe1571ORF8800P (100% identity) | M.Afe20731ORF1080P | |
| 1081 | 175 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1106 | 122 aa conserved hypothetical protein | |||
| 1107 | R | Afe1571ORF8660P (100% identity) | Afe20731ORF1108P | |
| 1108 | M | M.Afe1571ORF8660P (100% identity) | M.Afe20731ORF1108P | |
| 1109 | NUDIX hydrolase | |||
| 1213 | RNA modification enzyme, MiaB family | |||
| 1214 | R | Afe1571ORF8100P (100% identity) | Afe20731ORF1215P | |
| 1215 | M | M.Afe1571ORF8100P (100% identity) | M.Afe20731ORF1215P | |
| 1216 | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1319 | 90 aa hypothetical protein | |||
| 1320 | R | Afe1571ORF7565P (100% identity) | Afe20731ORF1320P | |
| 1321 | amidohydrolase | |||
| 1439 | 602 aa hypothetical protein | |||
| 1440 | R | 1056 aa hypothetical protein | Afe20731McrBP | |
| 1441 | diguanylate cyclase | |||