Limnothrix rosea IAM M-220 |
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Putative Limnothrix rosea IAM M-220 RM systems
Ref: Zhu,T. et al. unpublished
REBASE ref # 23716
Contig set: 4,065,449 bp
GenBank #: MRBY00000000 (NZ_MRBY00000000)
REBASE acronym: Lro220
Org_num: 23365
All begin NIES208_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16370 | 188 aa hypothetical protein | |||
| 16375 | R | Ssp130192ORFEP (87% identity) | Lro220ORF16360P | |
| 16380 | 200 aa hypothetical protein | |||
| 16385 | XisI protein | |||
| 16390 | fatty-acid oxidation protein subunit alpha | |||
| 16395 | S | 129 aa hypothetical protein | S1.Lro220ORF16360P | |
| 16270 | S | S.Cst7202ORF144P (32% identity) | S2.Lro220ORF16360P | |
| 16275 | DNA methyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9310 | 0 aa hypothetical protein | |||
| 9315 | M | M.Aeq4026ORF1405P (61% identity) | M.Lro220ORF9315P | |
| 9320 | R | Pag365ORF2758P (60% identity) | Lro220ORF9315P | |
| 9325 | dihydroxy-acid dehydratase | |||
| 10745 | TIGR03032 family protein | |||
| 10750 | RM | Lsp7376ORF3680P (69% identity) | Lro220ORF10750P | |
| 10755 | DNA-binding protein | |||
| 8720 | DNA damage-inducible protein D | |||
| 8725 | RM | PspETS05ORFVP (65% identity) | Lro220ORF8725P | |
| 8730 | diflavin flavoprotein A | |||
| 9170 | MFS transporter | |||
| 9175 | RM | LspO77ORF593P (64% identity) | Lro220ORF9175P | |
| 9180 | DUF2281 domain-containing protein | |||
| 4045 | AraC family transcriptional regulator | |||
| 4050 | M | M.AquIA (89% identity) | M1.Lro220ORF4050P | |
| 4055 | M | M.AquIB (91% identity) | M2.Lro220ORF4050P | |
| 4060 | R | AquI (84% identity) | Lro220ORF4050P | |
| 4065 | adenylate kinase | |||
| 8555 | 74 aa hypothetical protein | |||
| 8560 | M | M.Pag1268ORF4508P (70% identity) | M.Lro220ORF8560P | |
| 8565 | 741 aa hypothetical protein | |||
| 8245 | 4-(cytidine | |||
| 8250 | M | M.Our11008ORF1466P (65% identity) | M.Lro220ORF8250P | |
| 8255 | R | Csp6303ORF3717P (58% identity) | Lro220ORF8250P | |
| 8260 | flavin-dependent dehydrogenase | |||
| 3595 | 324 aa hypothetical protein | |||
| 3600 | M | M.Mva9802DndCP (57% identity) | M.Lro220DndCP | |
| 3605 | DNA sulfur modification protein DndD | |||
| 3600 | sulfurtransferase DndC | |||
| 3605 | M | M.Csi52DndDP (49% identity) | M.Lro220DndDP | |
| 3610 | DNA sulfur modification protein DndE | |||
| 3605 | DNA sulfur modification protein DndD | |||
| 3610 | M | M.Nsp4103DndEP (69% identity) | M.Lro220DndEP | |
| 3615 | succinate dehydrogenase flavoprotein subunit | |||
| 3765 | chemical-damaging agent resistance protein C | |||
| 3770 | M | M.Hsp7418ORF2575P (71% identity) | M.Lro220ORF3770P | |
| 3775 | 263 aa hypothetical protein | |||
| 500 | TIGR00300 family protein | |||
| 505 | M | M.MaeFD4ORF13945P (56% identity) | M.Lro220ORF505P | |
| 510 | R | Cap1201ORF2995P (58% identity) | Lro220ORF505P | |
| 515 | two-component response regulator ycf55-like | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15045 | abortive phage infection protein | |||
| 15050 | R | Ssp3757MrrP (54% identity) | Lro220MrrP | |
| 15055 | DNA-formamidopyrimidine glycosylase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17825 | 147 aa hypothetical protein | |||
| 17830 | M | M.Lsp7376ORF1087P (83% identity) | M.Lro220ORF17830P | |
| 17835 | 457 aa hypothetical protein | |||