Gardnerella vaginalis 409-05 |
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Putative Gardnerella vaginalis 409-05 RM systems
Ref: Durkin,A.S. et al. unpublished
REBASE ref # 11451
Complete sequence: 1,617,545 bp
GenBank #: CP001849 (NC_013721)
REBASE acronym: Gva409
Org_num: 5721
All begin HMPREF0424_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 870 | 298 aa hypothetical protein | |||
| 871 | R | GvaB477ORF3972P (100% identity) | Gva409ORF871P | |
| 872 | H+ Antiporter protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 81 | hydrolase, NUDIX family | |||
| 82 | M | M.Gsp1198PIII (98% identity) | GATC | M.Gva409ORF82P |
| 83 | R | Gsp288IP (99% identity) | GATC | Gva409ORF82P |
| 84 | polyphosphate kinase 1 | |||
| 533 | DNA binding domain, excisionase family | |||
| 534 | M | M1.Gva51ORF1135P (100% identity) | M1.Gva409ORF534P | |
| 535 | M | M2.Gva37ORF3105P (100% identity) | M2.Gva409ORF534P | |
| 536 | ATPase family associated with various cellular | |||
| 535 | DNA (cytosine-5-)-methyltransferase | |||
| 536 | R | R1.Gsp1001IIP (99% identity) | R1.Gva409ORF535P | |
| 537 | R | R2.Gsp1001IIP (100% identity) | R2.Gva409ORF535P | |
| 538 | 125 aa hypothetical protein | |||
| 541 | repeat protein | |||
| 542 | RM | 113 aa hypothetical protein | Gva409ORF542P | |
| 543 | YcaO-like family | |||
| 748 | 252 aa hypothetical protein | |||
| 749 | RM | M.Gsp1001ORF4605P (100% identity) | Gva409ORF749P | |
| 750 | Eco57I restriction endonuclease | |||
| 749 | 335 aa hypothetical protein | |||
| 750 | RM | Gsp1001ORF4605P (100% identity) | Gva409ORF750P | |
| 751 | 184 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 873 | ABC transporter, ATP-binding protein | |||
| ??? | M | DNA methyltransferase | M.Gva409ORFAP | |
| 874 | nucleoside triphosphatase, D5 family | |||