Citrobacter rodentium ICC168 |
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Putative Citrobacter rodentium ICC168 RM systems
Ref: Petty,N.K. et al. J. Bacteriol. 192 (2), 525-538 (2010)
REBASE ref # 11449
Complete sequence: 5,346,659 bp
GenBank #: FN543502 (NC_013716)
REBASE acronym: Cro168
Org_num: 5719
All begin ROD_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 33361 | 97 aa hypothetical protein | |||
| 33371 | S | S.Cro16636ORF9705P (100% identity) | S.Cro168ORF33411P | |
| 33381 | 548 aa conserved hypothetical protein | |||
| 33391 | 276 aa hypothetical protein (pseudogene) | |||
| 33401 | IS102 transposase | |||
| 33411 | M | M.Cro51459ORF1095P (100% identity) | M.Cro168ORF33411P | |
| 33421 | 600 aa hypothetical protein | |||
| 34251 | 174 aa conserved hypothetical protein | |||
| 34261 | M | M.Cro51459ORF22080P (100% identity) | M.Cro168ORF34261P | |
| 34271 | S | S.Cro51459ORF22080P (100% identity) | S.Cro168ORF34261P | |
| 34281 | R | Cro16636ORF9315P (100% identity) | Cro168ORF34261P | |
| 34291 | 362 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2621 | 546 aa hypothetical prophage protein | |||
| 2631 | M | M.Cro51459ORF3430P (100% identity) | M.Cro168ORF2631P | |
| 2641 | 166 aa hypothetical prophage protein | |||
| 9321 | prophage exported protein | |||
| 9331 | M | M.Cro51459ORF4865P (100% identity) | M.Cro168ORF9331P | |
| 9341 | prophage lipoprotein | |||
| 19781 | flagellin lysine-N-methylase | |||
| 19791 | M | M.Cro51459ORF8580P (85% identity) | M.Cro168ORF19791P | |
| 19792 | prophage DNA modification regulator | |||
| 20381 | membrane protein | |||
| 20391 | V | V.Cro51459DcmP (100% identity) | V.Cro168DcmP | |
| 20401 | M | M.Cro51459DcmP (100% identity) | CCWGG | M.Cro168DcmP |
| 20411 | phosphohydrolase | |||
| 26101 | phage holin | |||
| 26111 | M | M.Cro51459ORF23220P (100% identity) | M.Cro168ORF26111P | |
| 26121 | 63 aa hypothetical prophage protein | |||
| 26141 | 355 aa hypothetical prophage protein | |||
| 26151 | M | M.Cro16636ORF13270P (100% identity) | M.Cro168ORF26151P | |
| 26161 | prophage DNA adenine methylase | |||
| 26151 | prophage DNA cytosine methylase | |||
| 26161 | M | M2.Cro51459ORF8965P (100% identity) | GATC | M.Cro168DamP |
| 26171 | 290 aa hypothetical prophage protein | |||
| 26271 | 108 aa hypothetical prophage protein | |||
| 26281 | M | M.Cro51459ORF9025P (100% identity) | M.Cro168ORF26281P | |
| 26291 | 65 aa hypothetical prophage protein | |||
| 26321 | 595 aa hypothetical prophage protein | |||
| 26331 | M | M.Cro51459ORF9050P (100% identity) | M.Cro168ORF26331P | |
| 26351 | prophage CP4-57 integrase (fragment) | |||
| 45512 | predicted membrane protein yhdu | |||
| 45521 | M | M.Cro51459ORF15205P (100% identity) | ATGCAT | M.Cro168ORF45521P |
| 45531 | DNA-binding protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26151 | prophage DNA cytosine methylase | |||
| 26161 | M | M2.Cro51459ORF8965P (100% identity) | GATC | M.Cro168ORF26161P |
| 26171 | 290 aa hypothetical prophage protein | |||