Oceanisphaera profunda SM1222 |
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Putative Oceanisphaera profunda SM1222 RM systems
Ref: Xu,Z. et al. Int. J. Syst. Evol. Microbiol. 64 (PT 4), 1252-1256 (2014)
REBASE ref # 24627
Complete sequence: 3,508,860 bp
GenBank #: CP021377
REBASE acronym: Opr1222
Org_num: 24464
All begin CBP31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3010 | 105 aa hypothetical protein | |||
| 3015 | M | M.VcoRE22ORF3615P (77% identity) | TGAGNNNNNTAG | M.Opr1222I |
| 3020 | S | S.BpsP6ORF782P (32% identity) | TGAGNNNNNTAG | S.Opr1222I |
| 3025 | R | Mspo1ORFAP (72% identity) | TGAGNNNNNTAG | Opr1222IP |
| 3030 | 409 aa hypothetical protein | |||
| 15420 | 408 aa hypothetical protein | |||
| 15425 | M | M.Vfl0110ORFFP (79% identity) | M.Opr1222ORF15425P | |
| 15430 | S | S.Ave6454ORF21020P (41% identity) | S.Opr1222ORF15425P | |
| 15435 | ISAs1 family transposase | |||
| ??? | R | Vci242301ORFEP (40% identity) | Opr1222ORF15425AP | |
| 15450 | ISAs1 family transposase | |||
| 15455 | R | restriction endonuclease subunit R | Opr1222ORF15425BP | |
| 15460 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4365 | ribulose-phosphate 3-epimerase | |||
| 4370 | M | M.Osp1ORFEP (91% identity) | GATC | M.Opr1222Dam |
| 4375 | 471 aa hypothetical protein | |||
| 5920 | sulfite reductase [NADPH] flavoprotein, | |||
| 5925 | C | C.VchO49ORF1720P (78% identity) | C.Opr1222ORF5935P | |
| 5930 | R | Ahy3924ORF12110P (62% identity) | Opr1222ORF5935P | |
| 5935 | M | M.VchO49ORF1720P (84% identity) | M.Opr1222ORF5935P | |
| 5940 | DNA-directed RNA polymerase subunit beta | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6345 | 89 aa hypothetical protein | |||
| 6350 | R | AhyD4ORF23035P (49% identity) | Opr1222ORF6350P | |
| 6355 | 160 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6175 | 96 aa hypothetical protein | |||
| 6180 | R | Osp1ORFBP (97% identity) | Opr1222ORF6180P | |
| 6185 | 65 aa hypothetical protein | |||
| 12490 | topoisomerase | |||
| 12495 | R | Osp1ORFDP (95% identity) | Opr1222ORF12495P | |
| 12500 | SAM-dependent methyltransferase | |||