Acidovorax species P3 |
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Putative Acidovorax species P3 RM systems
Ref: Singleton,D.R. et al. unpublished
REBASE ref # 24624
| Sequence length: | GenBank #: | |
| Chromosome: | 4,077,847 bp | CP021362 |
| plasmid pACP3.1: | 258,084 bp | CP021363 |
| plasmid pACP3.2: | 156,922 bp | CP021364 |
| plasmid pACP3.3: | 72,779 bp | CP021365 |
REBASE acronym: AspP3
Org_num: 24459
All begin CBP35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6720 | Fe(3+) ABC transporter substrate-binding | |||
| 6725 | R | AspP4ORF12190P (100% identity) | AspP3ORF6735P | |
| 6730 | 161 aa hypothetical protein | |||
| 6735 | M | M.AspP4ORF12190P (100% identity) | M.AspP3ORF6735P | |
| 6740 | S | S.AspP4ORF12190P (66% identity) | S.AspP3ORF6735P | |
| 6745 | 633 aa hypothetical protein | |||
| 8210 | ATP-dependent RNA helicase HrpA | |||
| 8215 | M | M.AspP4ORF10715P (100% identity) | M.AspP3ORF8215P | |
| 8220 | 280 aa hypothetical protein | |||
| 8225 | 355 aa hypothetical protein | |||
| 8230 | 110 aa hypothetical protein | |||
| 8235 | 467 aa hypothetical protein | |||
| 8240 | S | S.AspP4ORF10715P (100% identity) | S.AspP3ORF8215P | |
| ??? | R | AspP4ORF10715P (93% identity) | AspP3ORF8215P | |
| 8250 | long-chain fatty acid--CoA ligase | |||
| 17180 | hydroxyacid dehydrogenase | |||
| 17185 | R | AspP4ORF1735P (100% identity) | AspP3ORF17205P | |
| 17190 | 176 aa hypothetical protein | |||
| 17195 | 104 aa hypothetical protein | |||
| 17200 | S | S.AspP4ORF1735P (100% identity) | S.AspP3ORF17205P | |
| 17205 | M | M.AspP4ORF1735P (100% identity) | M.AspP3ORF17205P | |
| 17210 | XRE family transcriptional regulator | |||
| plasmid pACP3.1 | ||||
| 18985 | 5-methyltetrahydropteroyltriglutamate-- | |||
| 18990 | R | AspP4ORF19055P (100% identity) | AspP3ORF19005P | |
| 18995 | MloB | |||
| 19000 | S | S.AspP4ORF19055P (100% identity) | S.AspP3ORF19005P | |
| 19005 | M | M.AspP4ORF19055P (100% identity) | M.AspP3ORF19005P | |
| 19010 | 89 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 470 | single-stranded DNA-binding protein | |||
| 475 | V | V.AspP4ORF18425P (100% identity) | V.AspP3ORF485P | |
| 480 | 374 aa hypothetical protein | |||
| 485 | M | M.AspP4ORF18425P (100% identity) | M.AspP3ORF485P | |
| 490 | tRNA 2-thiouridine(34) synthase MnmA | |||
| 8690 | 3-oxoacyl-[acyl-carrier-protein] reductase | |||
| ??? | RM | AspP4ORF10230P (85% identity) | AspP3ORF8695P | |
| 8700 | regulator | |||
| 8880 | abortive phage resistance protein | |||
| 8885 | RM | AspP4ORF10040P (100% identity) | AspP3ORF8885P | |
| 8890 | 575 aa hypothetical protein | |||
| 9000 | 576 aa hypothetical protein | |||
| 9005 | M | M.AspP4ORF9920P (100% identity) | M.AspP3ORF9005P | |
| 9010 | DNA polymerase V subunit UmuC | |||
| 13470 | 82 aa hypothetical protein | |||
| 13480 | M | M.AspP4ORF5455P (100% identity) | M.AspP3ORF13480P | |
| 13485 | 212 aa hypothetical protein | |||
| plasmid pACP3.2 | ||||
| 20885 | DNA polymerase V subunit UmuC | |||
| 20890 | R | AspP4ORF20810P (100% identity) | AspP3ORF20895P | |
| 20895 | M | M.AspP4ORF20810P (100% identity) | M.AspP3ORF20895P | |
| 20900 | 970 aa hypothetical protein | |||
| plasmid pACP3.3 | ||||
| 21300 | 73 aa hypothetical protein | |||
| 21305 | M | M.RpiH2Cu5ORF24150P (100% identity) | M.AspP3ORF21305P | |
| 21310 | phospholipase D family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 570 | spermidine synthase | |||
| 575 | R | AspP4ORF18325P (100% identity) | AspP3ORF585P | |
| 580 | transcriptional regulator | |||
| 585 | M | M.AspP4ORF18325P (100% identity) | M.AspP3ORF585P | |
| 590 | 74 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3675 | aspartate--tRNA ligase | |||
| 3680 | R | AspP4MrrP (100% identity) | AspP3MrrP | |
| 3685 | dihydroneopterin triphosphate diphosphatase | |||