Photobacterium damselae subsp. piscicida 91-197 |
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Putative Photobacterium damselae subsp. piscicida 91-197 RM systems
Ref: Teru,Y. et al. unpublished
REBASE ref # 24581
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,172,118 bp | AP018045 |
| chromosome 2: | 1,054,589 bp | AP018046 |
REBASE acronym: Pda91197
Org_num: 22983
All begin PDPUS_1_, PDPUS_2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1648 | 29 aa hypothetical protein | |||
| 1649 | S | S.Pda5557ORF7645P (100% identity) | S.Pda91197ORF1650P | |
| 1650 | M | M.Pda1590ORF2692P (99% identity) | M.Pda91197ORF1650P | |
| 1651 | 130 aa hypothetical protein | |||
| chromosome 2 | ||||
| 93 | site-specific tyrosine recombinase XerC | |||
| 94 | M | M.Pda51443ORF1182P (100% identity) | M.Pda91197ORF94P | |
| 95 | 389 aa hypothetical protein | |||
| 100 | WLM domain protein | |||
| 101 | R | Pda5557ORF21400P (100% identity) | Pda91197ORF103P | |
| 102 | S | S.Pda51443ORF1173P (100% identity) | S.Pda91197ORF103P | |
| 103 | M | M.Pda5557ORF21400P (100% identity) | M.Pda91197ORF103P | |
| 104 | 208 aa hypothetical protein | |||
| 113 | 130 aa hypothetical protein | |||
| 114 | M | N-6 DNA Methylase | M.Pda91197ORF114P | |
| 115 | S | S.Pda5557ORF21340P (100% identity) | S.Pda91197ORF114P | |
| 116 | 345 aa hypothetical protein | |||
| 117 | R | Pda51443ORF1162P (100% identity) | Pda91197ORF114P | |
| 118 | 98 aa hypothetical protein | |||
| 723 | IS1 transposase | |||
| 724 | M | M.Pda5557ORF19060P (100% identity) | M.Pda91197ORF724P | |
| 725 | S | S.Pda5557ORF19060P (100% identity) | S.Pda91197ORF724P | |
| 726 | 59 aa hypothetical protein | |||
| 727 | Group II intron-encoded protein LtrA | |||
| 728 | R | Pda51443ORF551P (100% identity) | R1.Pda91197ORF724P | |
| 729 | Group II intron-encoded protein LtrA | |||
| 730 | R | 202 aa hypothetical protein | R2.Pda91197ORF724P | |
| 731 | Transposase | |||
| 1066 | 53 aa hypothetical protein | |||
| 1067 | M | M.Pda5557ORF17415P (100% identity) | M.Pda91197ORF1067P | |
| 1068 | R | Pda51443ORF229BP (100% identity) | R1.Pda91197ORF1067P | |
| 1069 | IS1 transposase | |||
| 1070 | 73 aa hypothetical protein | |||
| 1071 | 91 aa hypothetical protein | |||
| 1072 | R | Pda5557ORF17415AP (100% identity) | R2.Pda91197ORF1067P | |
| 1073 | Ribosome biogenesis GTPase A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 616 | 94 aa hypothetical protein | |||
| 617 | R | Pda51443ORF646AP (100% identity) | Pda91197ORF625AP | |
| 618 | transposase | |||
| 619 | 98 aa hypothetical protein | |||
| 620 | transposase | |||
| 621 | 98 aa hypothetical protein | |||
| 622 | transposase | |||
| 623 | 64 aa hypothetical protein | |||
| 624 | 122 aa hypothetical protein | |||
| ??? | R | Pda5557ORF19415BP (100% identity) | Pda91197ORF625BP | |
| 625 | M | M.Pda51443ORF646P (100% identity) | M.Pda91197ORF625P | |
| 626 | Transposase | |||
| 812 | 3-oxoadipate enol-lactonase 2 | |||
| 813 | M | M.Pda5557ORF18325P (100% identity) | M.Pda91197ORF813P | |
| 814 | hydrolase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3019 | Ribulose-phosphate 3-epimerase | |||
| 3020 | M | M.Pda5557DamP (100% identity) | M.Pda91197ORF3020P | |
| 3021 | 520 aa hypothetical protein | |||