Campylobacter species RM6137 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Campylobacter species RM6137 RM systems
Ref: Miller,W.G. et al. Genome Biol Evol (2017) In press
REBASE ref # 24420
Complete sequence: 1,634,523 bp
GenBank #: CP018789
REBASE acronym: Csp6137
Org_num: 24385
All begin CSUIS_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 136 | carbonic anhydrase alpha | |||
| 137 | M | M.Uclbin18ORFAP (85% identity) | M.Csp6137ORF137P | |
| 138 | S | S.Psp1327I (36% identity) | S.Csp6137ORF137P | |
| 139 | R | Chy27631ORF1756P (86% identity) | Csp6137ORF137P | |
| 140 | superoxide dismutase (Cu/Zn) | |||
| 874 | TrkA domain protein | |||
| 875 | R | Csp13003ORF829P (87% identity) | Csp6137ORF876P | |
| 876 | M | M.Csp13003ORF829P (92% identity) | M.Csp6137ORF876P | |
| 877 | S | S.Csp13003ORF829P (48% identity) | S.Csp6137ORF876P | |
| 878 | queuine tRNA-ribosyltransferase | |||
| 1118 | ammonium transporter | |||
| 1119 | M | pseudogene | M.Csp6137ORF1119P | |
| ??? | S | Type I restriction enzyme, S subunit | S.Csp6137ORF1119P | |
| 1121 | toxin-antitoxin system, toxin | |||
| 1122 | 197 aa hypothetical protein | |||
| 1123 | membrane protein | |||
| 1124 | DUF955 domain protein | |||
| 1125 | beta family protein | |||
| 1127 | R | ChyCHY5ORF625P (91% identity) | Csp6137ORF1119P | |
| 1129 | Na+/proline symporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 387 | phosphoribosylanthranilate isomerase | |||
| 388 | M | M.ChyCHY5ORF1638P (87% identity) | M.Csp6137ORF388P | |
| 389 | anthranilate phosphoribosyltransferase / | |||
| 1060 | 171 aa hypothetical protein | |||
| 1061 | M | M.Ask12713ORF339P (71% identity) | M.Csp6137ORF1061P | |
| 1062 | R | Hwi2049ORF8035P (38% identity) | Csp6137ORF1061P | |
| 1104 | flagellar hook-associated protein | |||
| 1105 | R | Cla12894ORF1560P (81% identity) | Csp6137ORF1106P | |
| 1106 | M | M1.HpyU305ORF3485P (86% identity) | M1.Csp6137ORF1106P | |
| 1107 | M | M1.HpyKH44ORFLP (87% identity) | M2.Csp6137ORF1106P | |
| 1108 | inorganic phosphate transporter, PitA family | |||
| 1214 | UDP-4-amino-4, | |||
| 1215 | RM | Chy27631ORF1699P (62% identity) | Csp6137ORF1215P | |
| 1216 | UDP-4-amino-4,6-dideoxy-beta-L-AltNAc | |||
| 1488 | dihydroxyacid dehydratase | |||
| 1489 | R | Csp6876ORF970P (76% identity) | Csp6137ORF1490P | |
| 1490 | M | M.McrMPORF563P (58% identity) | M.Csp6137ORF1490P | |
| 1491 | flagellar hook protein | |||
| 1524 | 309 aa hypothetical protein | |||
| 1525 | R | Bpi1244ORF2585P (31% identity) | Csp6137ORF1525P | |
| 1526 | DNA methyltransferase | |||
| 1525 | restriction endonuclease | |||
| 1526 | M | M.Cje195ORF1739P (49% identity) | M.Csp6137ORF1526P | |
| 1527 | flavodoxin-like fold domain protein, putative | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1151 | fumarate reductase, iron-sulfur subunit | |||
| 1152 | R | Chy9260ORF1055P (74% identity) | Csp6137ORF1153P | |
| 1153 | M | M.Hpy4109ORFBP (55% identity) | M.Csp6137ORF1153P | |
| 1154 | old yellow enzyme (OYE)-related FMN binding | |||