Campylobacter lanienae NCTC 13004 |
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Putative Campylobacter lanienae NCTC 13004 RM systems
Ref: Miller,W.G. et al. Genome Biol Evol (2017) In press
REBASE ref # 24420
Complete sequence: 1,594,554 bp
GenBank #: CP015578
REBASE acronym: Cla13004
Org_num: 24380
All begin CLAN_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 109 | carbonic anhydrase alpha | |||
| 110 | M | M.Cla2308ORFCP (96% identity) | M.Cla13004ORF110P | |
| 111 | S | S.Cla2308ORFCP (100% identity) | S.Cla13004ORF110P | |
| 112 | virulence protein, RhuM family | |||
| 113 | R | Cla2308ORFCP (100% identity) | Cla13004ORF110P | |
| 114 | superoxide dismutase (Cu/Zn) | |||
| 314 | formate-dependent nitrite reductase NrfAH, | |||
| ??? | S | S.Hmu12031ORF1550P (29% identity) | S1.Cla13004ORF315P | |
| ??? | S | S.Oba18003ORF13530P (30% identity) | S2.Cla13004ORF315P | |
| 316 | [protein-PII] uridylyltransferase | |||
| 793 | 913 aa hypothetical protein | |||
| 794 | S | S.Cla2308ORFAP (93% identity) | S.Cla13004ORF796P | |
| 795 | Fic domain protein | |||
| 796 | M | M.Cla2308ORFAP (100% identity) | M.Cla13004ORF796P | |
| 797 | R | Cla2308ORFAP (100% identity) | Cla13004ORF796P | |
| 798 | 473 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 173 | glycosyltransferase, family 8 | |||
| 174 | S | S.Cla2308ORFEP (94% identity) | S.Cla13004ORF175P | |
| 175 | RM | Cla2308ORFEP (100% identity) | Cla13004ORF175P | |
| 177 | ribose-phosphate diphosphokinase | |||
| 309 | diacylglycerol kinase | |||
| 310 | R | Cla2308ORFIP (100% identity) | Cla13004ORF310P | |
| 311 | cytosine-specific DNA methyltransferase | |||
| 310 | type II restriction endonuclease, ThaI family | |||
| 311 | M | M.Cla2308ORFJP (95% identity) | M.Cla13004ORF311P | |
| 312 | MatE efflux family protein | |||
| 1082 | hydrogenase expression/formation protein HypD | |||
| 1083 | R | Cla2308ORFBP (96% identity) | Cla13004ORF1084P | |
| 1084 | M | M.Cla2308ORFBP (100% identity) | M.Cla13004ORF1084P | |
| 1085 | hydrogenase assembly chaperone HypC | |||
| 1326 | anthranilate phosphoribosyltransferase / | |||
| 1327 | M | M.Cla2308ORFGP (100% identity) | M1.Cla13004ORF1327P | |
| 1328 | M | M.Cla2308ORFHP (100% identity) | M2.Cla13004ORF1327P | |
| 1329 | R | Cla2308ORFHP (100% identity) | Cla13004ORF1327P | |
| 1330 | adenine-specific DNA methyltransferase (EcoRI | |||
| 1329 | HNH endonuclease domain protein | |||
| 1330 | M | M.Cla2308ORFFP (100% identity) | M.Cla13004ORF1330P | |
| 1331 | phosphoribosylanthranilate isomerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1187 | transcription termination factor | |||
| 1188 | M | M.Cla2308ORFDP (100% identity) | M.Cla13004ORF1188P | |
| 1189 | R | Cla2308ORFDP (99% identity) | Cla13004ORF1188P | |
| 1190 | 57 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1627 | pyridoxamine 5-phosphate oxidase-related, | |||
| 1628 | R | Cla2308MrrP (100% identity) | Cla13004MrrP | |
| 1629 | 23S rRNA pseudouridine 2605 synthase | |||