Salmonella enterica FORC_038 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica FORC_038 RM systems
Ref: Song,J.S. et al. unpublished
REBASE ref # 24398
Complete sequence: 4,938,076 bp
GenBank #: CP015574
REBASE acronym: Sen038
Org_num: 24327
All begin FORC38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4069 | 322 aa hypothetical protein | |||
| 4070 | R | SenUA13ORF1281P (100% identity) | RAACNNNNNNNGTGG | Sen038IP |
| 4071 | M | M.SenSL491ORF354P (100% identity) | RAACNNNNNNNGTGG | M.Sen038I |
| 4072 | S | S.Sen10533ORF19305P (100% identity) | RAACNNNNNNNGTGG | S.Sen038I |
| 4073 | 106 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 350 | DamX, an inner membrane protein involved in bile | |||
| 351 | M | Methyl-directed repair DNA adenine methylase | GATC | M.Sen038DamP |
| 352 | Ribulose-phosphate 3-epimerase | |||
| 445 | 54 aa hypothetical protein | |||
| 446 | M | Adenine-specific methyltransferase | ATGCAT | M.Sen038II |
| 447 | DNA-binding protein Fis | |||
| 712 | Acetyltransferase | |||
| 713 | M | M.SenUA13ORF2340P (100% identity) | TGGCCA | M.Sen038ORF713P |
| 714 | 921 aa hypothetical protein | |||
| 1074 | 118 aa hypothetical protein | |||
| 1075 | M | M.YpsF1ORFCP (100% identity) | M.Sen038ORF1075P | |
| 1076 | 55 aa hypothetical protein | |||
| 1216 | 281 aa hypothetical protein | |||
| 1217 | M | M.YpsF1ORFDP (95% identity) | M.Sen038ORF1217P | |
| 1218 | 387 aa hypothetical protein | |||
| 1246 | 148 aa hypothetical protein | |||
| 1247 | M | M.YpsF1ORFBP (100% identity) | M.Sen038ORF1247P | |
| 1248 | 85 aa hypothetical protein | |||
| 2010 | DNA-cytosine methyltransferase | |||
| 2011 | V | V.StyTDcmP (100% identity) | V.Sen038DcmP | |
| 2012 | Permease of the drug/metabolite transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3630 | Cytochrome bd2, subunit I | |||
| 3631 | R | SenZYXORFDP (99% identity) | CAGAG | Sen038IIIP |
| 3632 | M | M.SenWT7II (100% identity) | CAGAG | M.Sen038III |
| 3633 | metabolite transport protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2009 | metal-dependent phosphohydrolase | |||
| 2010 | M | M.SenST01ORF6245P (100% identity) | CCWGG | M.Sen038ORF2010P |
| 2011 | Very-short-patch mismatch repair endonuclease | |||