Escherichia coli HB-Coli0 |
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Putative Escherichia coli HB-Coli0 RM systems
Ref: Zhang,S. unpublished
REBASE ref # 24381
| Sequence length: | GenBank #: | |
| Chromosome: | 4,858,944 bp | CP020933 |
| plasmid unnamed3: | 64,749 bp | CP020936 |
REBASE acronym: EcoHB
Org_num: 24234
All begin B9W17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6855 | 0 aa hypothetical protein | |||
| 6860 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoHBIP |
| 6865 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoHBI |
| 6870 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoHBI |
| 6875 | 540 aa hypothetical protein | |||
| 23865 | 322 aa hypothetical protein | |||
| 23870 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoHBIIP |
| 23875 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoHBII |
| ??? | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoHBII |
| 23890 | 113 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 26350 | 3-phosphatase | |||
| ??? | R | EcoL9ORF23295P (99% identity) | GAYNNNNNRTGA | EcoHBIIIP |
| 25980 | S | S.EcoL9ORF23295P (100% identity) | GAYNNNNNRTGA | S.EcoHBIII |
| 25985 | M | M.EcoL9ORF23295P (100% identity) | GAYNNNNNRTGA | M.EcoHBIII |
| 25990 | prevent-host-death family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4335 | cell division protein DamX | |||
| 4340 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoHBDamP |
| 4345 | ribulose-phosphate 3-epimerase | |||
| 4895 | transporter | |||
| 4900 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoHBORF4900P |
| 4905 | Fis family transcriptional regulator | |||
| 12270 | phosphohydrolase | |||
| 12275 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoHBDcm |
| 12280 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoHBDcmP |
| 12285 | drug/metabolite exporter YedA | |||
| 21960 | LexA family transcriptional regulator | |||
| 21965 | M | M.Sso90ORF15820P (99% identity) | GATC | M.EcoHBORF21965P |
| 21970 | 164 aa hypothetical protein | |||
| 24160 | 195 aa hypothetical protein | |||
| 24165 | M | M.EcofEC1ORF1985P (100% identity) | RGACAG | M.EcoHBIV |
| 24170 | DEAD/DEAH box helicase | |||
| plasmid unnamed3 | ||||
| 26240 | recombination-associated protein RdgC | |||
| 26245 | M | M.EcoL9ORF23400P (100% identity) | M.EcoHBORF26245P | |
| 26250 | transposase | |||