Paracoccus contaminans RKI 16-01929T=LMG 29738T=CCM 8701T=CIP 111112T |
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Putative Paracoccus contaminans RKI 16-01929T=LMG 29738T=CCM 8701T=CIP 111112T RM systems
Ref: Aurass,P. et al. unpublished
REBASE ref # 24359
Complete sequence: 2,939,512 bp
GenBank #: CP020612
REBASE acronym: PcoRK1
Org_num: 24045
All begin B0A89_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 965 | 125 aa hypothetical protein | |||
| 970 | R | Pye643ORF14845BP (41% identity) | CCCGGG | PcoRK1IIIP |
| 975 | M | M.Pye643ORF14845P (87% identity) | CCCGGG | M.PcoRK1III |
| 980 | resolvase | |||
| 995 | 113 aa hypothetical protein | |||
| 1000 | M | M.SspAM1D1ORF14205P (67% identity) | M.PcoRK1ORF1000P | |
| 1005 | 296 aa hypothetical protein | |||
| 2550 | 307 aa hypothetical protein | |||
| 2555 | RM | Pst25392ORF980P (89% identity) | PcoRK1ORF2555P | |
| 2560 | integrase | |||
| 2585 | 162 aa hypothetical protein | |||
| 2590 | M | M2.Pst25392ORF935P (94% identity) | M.PcoRK1ORF2590P | |
| 2595 | DNA methyltransferase | |||
| 2590 | DNA methylase | |||
| 2595 | M | M.Ssp067ORF5585P (77% identity) | M.PcoRK1ORF2595P | |
| 2600 | 60 aa hypothetical protein | |||
| 2600 | 60 aa hypothetical protein | |||
| 2605 | M | M.PspD09ORF14650P (97% identity) | M.PcoRK1ORF2605P | |
| 2610 | 69 aa hypothetical protein | |||
| 3410 | sensor histidine kinase | |||
| ??? | M | M.DspG19ORF8510P (25% identity) | M.PcoRK1ORFAP | |
| ??? | R | AspBHII (43% identity) | PcoRK1ORFAP | |
| 3425 | 163 aa hypothetical protein | |||
| 5185 | terminase | |||
| 5190 | M | M.CbaLH4ORF19740P (85% identity) | ATCGAT | M.PcoRK1IV |
| 5195 | R | CbaLH4ORF19740P (91% identity) | ATCGAT | PcoRK1IVP |
| 5200 | phage portal protein | |||
| 5260 | helicase | |||
| 5265 | RM | AspSUL3ORF25905P (74% identity) | PcoRK1ORF5265P | |
| 5270 | restriction endonuclease | |||
| 5400 | 88 aa hypothetical protein | |||
| 5405 | M | M1.Pye20ORF20175P (91% identity) | M.PcoRK1ORF5405P | |
| 5410 | DNA methylase | |||
| 5405 | DNA methyltransferase | |||
| 5410 | M | M1.Ssu3ORF1490P (94% identity) | M.PcoRK1ORF5410P | |
| 5415 | 142 aa hypothetical protein | |||
| 6810 | ribonuclease HII | |||
| 6815 | M | M.PspOMIV (87% identity) | GANTC | M.PcoRK1II |
| 6820 | MFS transporter | |||
| 10785 | 142 aa hypothetical protein | |||
| 10790 | M | M.RspBSW8ORF13880P (97% identity) | M.PcoRK1ORF10790P | |
| 10795 | 0 aa hypothetical protein | |||
| 10790 | DNA methylase | |||
| 10795 | M | M.RbaPBA2aORF18255P (87% identity) | M.PcoRK1ORF10795P | |
| 10800 | 74 aa hypothetical protein | |||
| 10920 | 83 aa hypothetical protein | |||
| 10925 | V | V.Rsp27ORFBP (96% identity) | V.PcoRK1ORF10930P | |
| 10930 | M | M.Rsp27ORFBP (91% identity) | M.PcoRK1ORF10930P | |
| 10935 | R | Bva18ORF7375P (33% identity) | PcoRK1ORF10930P | |
| 10940 | 339 aa hypothetical protein | |||
| 11060 | DUF159 family protein | |||
| 11065 | M | M.DspMaORF3676P (73% identity) | M.PcoRK1ORF11065P | |
| ??? | C | Type II restriction enzyme C protein | C.PcoRK1ORF11065P | |
| ??? | R | R2.DspMaORF3676P (61% identity) | PcoRK1ORF11065P | |
| 11075 | 474 aa hypothetical protein | |||
| 12255 | redox-regulated ATPase YchF | |||
| 12265 | M | M2.PspSC26ORF15095P (99% identity) | ACTGGG | M1.PcoRK1I |
| 12270 | M | M1.Pye20ORF20325P (100% identity) | ACTGGG | M2.PcoRK1I |
| 12275 | 70 aa hypothetical protein | |||
| 12365 | 148 aa hypothetical protein | |||
| 12370 | M | M.PspSC26ORF15060P (97% identity) | M1.PcoRK1ORF12370P | |
| 12375 | M | M.RspBSW8ORF13875P (85% identity) | M2.PcoRK1ORF12370P | |
| 12380 | 74 aa hypothetical protein | |||
| 12660 | peptidase M23 | |||
| 12665 | M | M1.Msp2077ORF19515P (76% identity) | M1.PcoRK1ORF12665P | |
| 12670 | M | M2.SmeAK21ORF1880P (74% identity) | M2.PcoRK1ORF12665P | |
| 12675 | RM | Msp2077ORF19515P (88% identity) | PcoRK1ORF12665P | |
| 12680 | 681 aa hypothetical protein | |||
| 12790 | 148 aa hypothetical protein | |||
| 12795 | M | M2.Szo19623ORF16935P (91% identity) | M1.PcoRK1ORF12795P | |
| 12800 | M | M.Pye20ORF9010P (81% identity) | M2.PcoRK1ORF12795P | |
| 12805 | 71 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1005 | 296 aa hypothetical protein | |||
| 1010 | R | RspBSW8ORF14125P (97% identity) | PcoRK1ORF1015P | |
| 1015 | M | M.Pst25392ORF11295P (76% identity) | M.PcoRK1ORF1015P | |
| 1020 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione | |||