Campylobacter cuniculorum LMG 24588 |
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Putative Campylobacter cuniculorum LMG 24588 RM systems
Ref: Miller,W.G. et al. unpublished
REBASE ref # 24482
Complete sequence: 1,931,011 bp
GenBank #: CP020867
REBASE acronym: Ccu24588
Org_num: 23996
All begin CCUN_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 732 | acyl-CoA thioesterase | |||
| 733 | M | M.Ccu8469ORF6585P (100% identity) | M.Ccu24588ORF733P | |
| 734 | S | S.Ccu8469ORF6585P (100% identity) | S.Ccu24588ORF733P | |
| 735 | R | Ccu8469ORF6585P (100% identity) | Ccu24588ORF733P | |
| 736 | metal-dependent hydrolase (DUF45 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3 | DNA gyrase, subunit B | |||
| 4 | M | M.Ccu8469ORF2870P (100% identity) | M.Ccu24588ORF4P | |
| 5 | R | Ccu8469ORF2870P (100% identity) | Ccu24588ORF4P | |
| 6 | YejM-like alkaline phosphatase superfamily | |||
| 7 | 7-cyano-7-deazaguanine reductase | |||
| 8 | R | Ccu8469ORF2900P (100% identity) | Ccu24588ORF9P | |
| 9 | M | M.Ccu8469ORF2900P (100% identity) | M.Ccu24588ORF9P | |
| 10 | 30S ribosomal protein S10 | |||
| 169 | phosphoribosyl-AMP cyclohydrolase / | |||
| 170 | R | Ccu8469ORF3715P (100% identity) | Ccu24588ORF171P | |
| 171 | M | M.Ccu8469ORF3715P (100% identity) | M.Ccu24588ORF171P | |
| 172 | 100 aa hypothetical protein | |||
| 172 | 100 aa hypothetical protein | |||
| 173 | RM | Ccu8469ORF3735P (90% identity) | Ccu24588ORF173P | |
| 174 | imidazole glycerol phosphate synthase HisFH, | |||
| 178 | restriction endonuclease-replacing | |||
| 179 | M | M.Ccu8469ORF3760P (97% identity) | M.Ccu24588ORF179P | |
| 180 | type II restriction endonuclease, PabI family | |||
| 179 | pseudogene | |||
| 180 | R | Ccu8469ORF3765P (100% identity) | Ccu24588ORF181P | |
| 181 | M | M.Ccu8469ORF3770P (98% identity) | M.Ccu24588ORF181P | |
| 182 | imidazoleglycerol-phosphate dehydratase / | |||
| 703 | inorganic pyrophosphatase | |||
| 704 | M | M.Ccu8469ORF6415P (100% identity) | M.Ccu24588ORF704P | |
| 705 | 65 aa hypothetical protein | |||
| 1123 | hydroxymethylpyrimidine kinase / | |||
| 1124 | R | Ccu8469ORF8525P (100% identity) | Ccu24588ORF1125P | |
| 1125 | M | M.Ccu8469ORF8525P (100% identity) | M.Ccu24588ORF1125P | |
| 1126 | tetrahydrodipicolinate succinylase | |||
| 1409 | UvrABC nucleotide excision repair complex, | |||
| 1410 | R | Ccu8469ORF400P (91% identity) | Ccu24588ORF1411P | |
| 1411 | M | M1.Ccu8469ORF400P (99% identity) | M1.Ccu24588ORF1411P | |
| 1412 | M | M2.Ccu8469ORF400P (99% identity) | M2.Ccu24588ORF1411P | |
| 1413 | type II restriction endonuclease, TdeIII family | |||
| 1412 | DNA methyltransferase | |||
| 1413 | R | Ccu8469ORF415P (86% identity) | Ccu24588ORF1414P | |
| 1414 | M | M.Ccu8469ORF415P (100% identity) | M.Ccu24588ORF1414P | |
| 1415 | dITP/XTP pyrophosphatase | |||
| 1756 | 3-methyladenine DNA glycosylase | |||
| 1757 | M | M.Ccu8469ORF2115P (100% identity) | M.Ccu24588ORF1757P | |
| 1758 | HNH endonuclease | |||
| 1770 | N-succinyl-diaminopimelate deacylase | |||
| 1771 | RM | Ccu8469ORF2185P (100% identity) | Ccu24588ORF1771P | |
| 1772 | thiamin biosynthesis protein | |||
| 1841 | acetylglutamate kinase | |||
| 1842 | RM | Ccu8469ORF2555P (100% identity) | Ccu24588ORF1842P | |
| 1843 | acetyltransferase | |||
| 1844 | N-acetyl-gamma-glutamylphosphate reductase | |||
| 1845 | M | M.Ccu8469ORF2570P (100% identity) | M.Ccu24588ORF1845P | |
| 1846 | translation initiation factor IF-3 | |||
| 1872 | 121 aa hypothetical protein | |||
| 1873 | M | M.Ccu8469ORF2715P (100% identity) | M.Ccu24588ORF1873P | |
| 1874 | 114 aa hypothetical protein | |||
| 1888 | 297 aa hypothetical protein | |||
| 1889 | M | M.Ccu8469ORF2790P (90% identity) | M.Ccu24588ORF1889P | |
| 1890 | aldo/keto reductase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1814 | lipid A disaccharide synthase | |||
| 1815 | M | M.Ccu8469ORF2410P (100% identity) | M.Ccu24588ORF1815P | |
| 1816 | R | Ccu8469ORF2410P (98% identity) | Ccu24588ORF1815P | |
| 1817 | 662 aa hypothetical protein (DUF1561 domain) | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1366 | zinc ABC transporter ZnuABC, membrane protein | |||
| 1367 | R | Ccu8469McrCP (100% identity) | Ccu24588McrCP | |
| 1368 | R | Ccu8469McrBP (100% identity) | Ccu24588McrBP | |
| 1369 | Na+/sulfate symporter family protein | |||