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Putative Veillonella parvula DSM 2008 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14167
Complete sequence: 2,132,142 bp
GenBank #: CP001820 (NC_013520)
REBASE acronym: Vpa2008
Org_num: 5642
All begin Vpar_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
115 | 169 aa hypothetical protein | |||
116 | M | M.Vpa11810I (100% identity) | GGCANNNNNNTTA | M.Vpa2008I |
117 | S | S.Vpa11810I (100% identity) | GGCANNNNNNTTA | S.Vpa2008I |
118 | R | Vpa11810IP (100% identity) | GGCANNNNNNTTA | Vpa2008IP |
119 | ABC transporter related protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
181 | GMP synthase, large subunit | |||
182 | R | Vpa11810ORF191P (100% identity) | CCGG | Vpa2008ORF182P |
183 | 380 aa hypothetical protein | |||
183 | 380 aa hypothetical protein | |||
184 | M | M.Vpa11810ORF191P (100% identity) | CCGG | M.Vpa2008ORF184P |
185 | restriction endonuclease | |||
184 | DNA-cytosine methyltransferase | |||
185 | R | Vpa11810ORF192P (100% identity) | CCWGG | Vpa2008ORF185P |
186 | 136 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
447 | transcriptional regulator, XRE family | |||
448 | M | M.Vpa11810II (100% identity) | GNAATC | M.Vpa2008II |
449 | R | Vpa11810IIP (100% identity) | GNAATC | Vpa2008IIP |
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
1556 | NUDIX hydrolase | |||
1557 | R | Vpa11810ORF1635P (100% identity) | Vpa2008ORF1557P | |
1558 | 309 aa hypothetical protein | |||
1739 | 276 aa hypothetical protein | |||
1740 | R | Vpa11810McrCP (100% identity) | Vpa2008McrCP | |
1741 | R | Vpa11810McrBP (100% identity) | Vpa2008McrBP | |
1742 | cytoplasmic protein |