Escherichia coli 20Ec-P-124 |
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Putative Escherichia coli 20Ec-P-124 RM systems
Ref: Sekizuka,T. et al. Sci. Rep. (2017) In press
REBASE ref # 23852
| Sequence length: | GenBank #: | |
| Chromosome: | 4,920,828 bp | AP017610 |
| plasmid pMRY16-002_2: | 108,986 bp | AP017612 |
| plasmid pMRY16-002_3: | 108,957 bp | AP017613 |
REBASE acronym: Eco124
Org_num: 22909
All begin MRY16002_c, MRY16002_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 29990 | lactate utilization protein C | |||
| 30000 | R | EcoW087ORF4400P (100% identity) | Eco124ORF30020P | |
| 30010 | S | S.EcoWH398ORF26840P (100% identity) | S.Eco124ORF30020P | |
| 30020 | M | M.Ecos641ORF18845P (100% identity) | M.Eco124ORF30020P | |
| 30030 | 212 aa hypothetical protein | |||
| 45010 | toxic protein SymE | |||
| 45020 | R | Ecos641ORF3050P (100% identity) | Eco124ORF45040P | |
| 45030 | S | S.Ecos641ORF3050P (100% identity) | S.Eco124ORF45040P | |
| 45040 | M | M.Ecos641ORF3050P (99% identity) | M.Eco124ORF45040P | |
| 45050 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5610 | PerC transcriptional activator | |||
| 5620 | M | M.Sso90ORF15820P (99% identity) | GATC | M.Eco124ORF5620P |
| 5630 | LexA repressor | |||
| 5690 | 64 aa hypothetical protein | |||
| 5700 | M | M.EcosE1ORFAP (100% identity) | M.Eco124ORF5700P | |
| 5710 | 64 aa hypothetical protein | |||
| 8210 | NinB protein | |||
| 8220 | M | M.SflWW1ORF7070P (99% identity) | GATC | M.Eco124ORF8220P |
| 8230 | 113 aa hypothetical protein | |||
| 19900 | inner membrane transporter YedA | |||
| 19910 | V | V.EcosEC7DcmP (100% identity) | V.Eco124DcmP | |
| 19920 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco124DcmP |
| 19930 | hydrolase | |||
| 33810 | DNA-binding protein Fis | |||
| 33820 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco124ORF33820P |
| 33830 | 59 aa hypothetical protein | |||
| 34940 | ribulose-phosphate 3-epimerase | |||
| 34950 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco124DamP |
| 34960 | cell division protein DamX | |||
| 41870 | 172 aa hypothetical protein | |||
| 41880 | M | M.EcoCP83ORF22545P (100% identity) | M.Eco124ORF41880P | |
| 41890 | 116 aa hypothetical protein | |||
| 42010 | PerC transcriptional activator | |||
| 42020 | M | M.EcoBCE049ORF25000P (100% identity) | GATC | M.Eco124ORF42020P |
| 42030 | LexA repressor | |||
| plasmid pMRY16-002_2 | ||||
| 21100 | 76 aa hypothetical protein | |||
| ??? | M | M.Ecos9ORF25140P (99% identity) | M.Eco124ORF21110P | |
| 21130 | 269 aa hypothetical protein | |||
| plasmid pMRY16-002_3 | ||||
| 30750 | 308 aa hypothetical protein | |||
| 30760 | M | M.EcoV04ORF25795P (100% identity) | SAY | M.Eco124ORF30760P |
| 30770 | 73 aa hypothetical protein | |||