Campylobacter helveticus ATCC 51209 |
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Putative Campylobacter helveticus ATCC 51209 RM systems
Ref: Miller,W.G. et al. unpublished
REBASE ref # 24464
Complete sequence: 1,758,726 bp
GenBank #: CP020478
REBASE acronym: Che51209
Org_num: 23888
All begin CHELV3228_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 731 | 1224 aa hypothetical protein | |||
| 732 | M | M.Che12470VI (100% identity) | ATCNNNNNNCTC | M.Che51209VI |
| 733 | S | S.Che12470VI (100% identity) | ATCNNNNNNCTC | S.Che51209VI |
| 734 | R | Che12470VIP (100% identity) | ATCNNNNNNCTC | Che51209VIP |
| 735 | UDP-N-acetylmuramate-alanine ligase | |||
| 1771 | 253 aa hypothetical protein (DUF541 domain) | |||
| ??? | S | type I restriction-modification system specificity subunit S | S1.Che51209ORF1776P | |
| ??? | S | S.Csp25113ORF1607P (42% identity) | S2.Che51209ORF1776P | |
| 1777 | gamma carbonic anhydrase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16 | N-acetyl-gamma-glutamylphosphate reductase | |||
| 17 | R | Che12470ORF33P (100% identity) | GGATG | Che51209ORF18P |
| 18 | M | M1.Che12470ORF33P (100% identity) | GGATG | M1.Che51209ORF18P |
| 19 | M | M2.Che12470ORF33P (100% identity) | GGATG | M2.Che51209ORF18P |
| 20 | adenine-specific DNA methyltransferase (EcoRI | |||
| 19 | adenine-specific DNA methyltransferase | |||
| 20 | M | M.Che12470I (100% identity) | RAATTY | M.Che51209III |
| 21 | R | Che12470IP (100% identity) | RAATTY | Che51209IIIP |
| 22 | DNA topoisomerase I | |||
| 132 | molybdopterin synthase, small subunit | |||
| 133 | R | Che12470IVP (100% identity) | GGNCC | Che51209VIIP |
| 134 | M | M.Che12470IV (100% identity) | GGNCC | M.Che51209VII |
| 135 | copper oxidase | |||
| 253 | imidazoleglycerol-phosphate dehydratase / | |||
| 254 | M | M.Che12470ORF273P (100% identity) | GATC | M.Che51209I |
| 255 | R | Che12470ORF273P (100% identity) | GATC | Che51209IP |
| 256 | imidazole glycerol phosphate synthase HisFH, | |||
| 316 | 50S ribosomal protein L9 | |||
| 317 | RM | Che12470ORF336P (100% identity) | Che51209ORF317P | |
| 318 | heat shock protein HslVU, ATP-dependent protease | |||
| 390 | GMP synthase (acetyltransferase domains) | |||
| 391 | R | Che9613ORF4880P (94% identity) | Che51209ORF392P | |
| 392 | M | M.Che9613ORF4880P (100% identity) | CATG | M.Che51209ORF392P |
| 393 | DNA polymerase I, 5 --> 3 polymerase, 5 --> | |||
| 831 | 172 aa hypothetical protein | |||
| 832 | M | M.Che12470ORF868P (100% identity) | M.Che51209ORF832P | |
| 833 | R | Cup6824ORF3270P (94% identity) | Che51209ORF832P | |
| 834 | phosphate ABC transporter, periplasmic | |||
| 879 | 204 aa hypothetical protein | |||
| 880 | RM | Che12470ORF920P (99% identity) | Che51209ORF880P | |
| 881 | MatE efflux family protein | |||
| 918 | 429 aa hypothetical protein | |||
| 919 | M | M.Che12470III (100% identity) | GANTC | M.Che51209II |
| 920 | R | Che12470IIIP (100% identity) | GANTC | Che51209IIP |
| 921 | molybdenum cofactor guanylyltransferase protein | |||
| 933 | tRNA m5U54 methyltransferase | |||
| 934 | RM | Che12470ORF977P (100% identity) | Che51209ORF934P | |
| 935 | pseudogene | |||
| 1231 | 471 aa hypothetical protein | |||
| 1232 | M | M.Che12470II (98% identity) | ACNGT | M.Che51209IV |
| 1233 | 249 aa hypothetical protein | |||
| 1234 | 407 aa hypothetical protein | |||
| 1235 | R | Che12470IIP (100% identity) | ACNGT | Che51209IVP |
| 1236 | chorismate mutase / prephenate dehydratase | |||
| 1233 | 249 aa hypothetical protein | |||
| 1234 | M | M.Che12470ORF1292P (100% identity) | CCWGG | M.Che51209ORF1234P |
| 1235 | type II restriction endonuclease | |||
| 1281 | thiamin biosynthesis protein | |||
| 1282 | RM | Cup11840ORF628P (69% identity) | Che51209ORFAP | |
| 1283 | N-succinyl-diaminopimelate deacylase | |||
| 1487 | pseudogene | |||
| 1488 | R | Che12470ORF1558P (99% identity) | Che51209ORF1489P | |
| 1489 | M | M.Che12470ORF1558P (100% identity) | GTAC | M.Che51209ORF1489P |
| 1490 | thioredoxin | |||
| 1540 | peptide chain release factor 1 | |||
| 1541 | R | Che12470ORF1611P (100% identity) | GAAGA | Che51209ORF1542P |
| 1542 | M | M1.Che12470ORF1611P (100% identity) | GAAGA | M1.Che51209ORF1542P |
| 1543 | M | M2.Che12470ORF1611P (100% identity) | GAAGA | M2.Che51209ORF1542P |
| 1544 | formyltransferase domain-containing protein | |||
| 1554 | 16S rRNA m7G527 methyltransferase | |||
| 1555 | RM | Che12470ORF1625P (100% identity) | Che51209ORF1555P | |
| 1556 | acetyl-CoA carboxylase, biotin carboxylase | |||
| 1603 | 71 aa hypothetical protein | |||
| 1604 | M | M.Che9613ORF8105P (98% identity) | CCGG | M.Che51209V |
| 1605 | GTP-binding protein | |||
| 1824 | 23S rRNA pseudouridine 2605 synthase | |||
| 1825 | M | M1.HciP01DORFJP (92% identity) | CCATC | M1.Che51209ORF1825P |
| 1826 | M | M2.Che12470ORF1910P (100% identity) | CCATC | M2.Che51209ORF1825P |
| ??? | R | Che12470ORF1910P (100% identity) | CCATC | Che51209ORF1825P |
| 1828 | RuvABC resolvasome, subunit RuvC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 818 | argininosuccinate synthase | |||
| 819 | R | Che12470ORF855P (100% identity) | Che51209ORF820P | |
| ??? | M | M.Che12470ORF855P (100% identity) | M.Che51209ORF820P | |
| 822 | pyridoxine 5-phosphate synthase | |||
| 1766 | Na+/H+ antiporter family protein | |||
| 1767 | R | Che12470ORF1850P (100% identity) | Che51209ORF1768P | |
| 1768 | M | M.Che12470ORF1850P (100% identity) | M.Che51209ORF1768P | |
| 1769 | radical SAM superfamily enzyme (SPASM domain) | |||