Ref: Kerrigan,L. et al. unpublished

REBASE ref # 24272

Complete sequence: 2,244,886 bp

GenBank #: CP020423

REBASE acronym: Nme212

Org_num: 23839

 

All begin A6J51_

Type II
ORF Gene Most similar Specificity Name
 
2025 184 aa hypothetical protein
2030 M M2.Nme98ORF45P (100% identity) GATC M2.Nme212ORF2030P
2035 M M1.Nme6455ORF7P (99% identity) GATC M1.Nme212ORF2030P
2040 leucine--tRNA ligase
 
2215 123 aa hypothetical protein
2220 R NmeW135ORF222P (100% identity) Nme212ORF2225P
2225 M M.NmeMBW2I (99% identity) M.Nme212ORF2225P
13175 IS5/IS1182 family transposase
 
3445 RNA-binding transcriptional accessory protein
3450 M M1.NmeM395ORFJP (100% identity) GGTGA M1.Nme212ORF3450P
3455 M Rieske (2Fe-2S) protein GGTGA M2.Nme212ORF3450P
3460 UDP-glucose 4-epimerase GalE
 
13425 48 aa hypothetical protein
4785 M DNA cytosine methyltransferase CCGG M.Nme212ORF4785P
4790 R TIGR02391 family protein CCGG Nme212ORF4785P
4795 V very short patch repair endonuclease V.Nme212ORF4785P
4800 DUF3418 domain-containing protein
 
4800 DUF3418 domain-containing protein
4805 M M.Nme6455I (100% identity) GTSAC M.Nme212I
4810 R Nme6455IP (100% identity) GTSAC Nme212IP
4815 ATP-dependent RNA helicase HrpA
 
7445 IS5/IS1182 family transposase
7455 M DNA cytosine methyltransferase GCGCGC M.Nme212ORF7455P
7460 restriction endonuclease
 
9540 3-isopropylmalate dehydrogenase
9545 R restriction endonuclease GGNNCC Nme212ORF9550P
??? M DNA -methyltransferase GGNNCC M.Nme212ORF9550P
9565 3-isopropylmalate dehydratase small subunit
 
12325 ADP-L-glycero-D-mannoheptose-6-epimerase
12330 R HNH endonuclease Nme212ORF12335P
12335 M M.NmeW135ORF855P (100% identity) CCAGA M.Nme212ORF12335P
12340 D-glycero-beta-D-manno-heptose-7-phosphate
 
12845 phenylalanine--tRNA ligase subunit beta
12850 R restriction endonuclease RCCGGY Nme212ORF12855P
12855 M DNA cytosine methyltransferase M.Nme212ORF12855P
12860 V very short patch repair endonuclease V.Nme212ORF12855P
12865 phenylalanine--tRNA ligase subunit alpha
Type III
ORF Gene Most similar Specificity Name
 
8845 alpha-hydroxy-acid oxidizing protein
8850 R Nme6455ORF777P (100% identity) Nme212ORF8855P
8855 M M.Nme13856ORF955P (93% identity) M.Nme212ORF8855P
8860 tRNA pseudouridine(55) synthase TruB
 
9480 peptidylprolyl isomerase
9485 M M.Nme6455ORF885P (100% identity) CCACC M.Nme212ORF9485P
9490 R Nme6455ORF885P (100% identity) CCACC Nme212ORF9485P
9495 tRNA 2-thiocytidine(32) synthetase TtcA