Ref: Minogue,T. et al. unpublished

REBASE ref # 24273

Complete sequence: 2,305,818 bp

GenBank #: CP020402

REBASE acronym: Nme215

Org_num: 27597

 

All begin A6J54_

Type I
ORF Gene Most similar Specificity Name
 
14135 IS1595 family transposase
8930 M M.Nme211ORF11510P (100% identity) M.Nme215ORF8930P
8935 IS5-like element IS1301 family transposase
 
10875 ATP-dependent Clp protease ATP-binding subunit
10880 R Nme211IP (100% identity) CAGNNNNNCTG Nme215IP
10885 62 aa hypothetical protein
10890 60 aa hypothetical protein
10895 S S.NmeH44ORF1653P (64% identity) CAGNNNNNCTG S.Nme215I
10900 DNA-damage-inducible D domain protein
10905 M M.Nme211I (100% identity) CAGNNNNNCTG M.Nme215I
10910 ADP-glyceromanno-heptose 6-epimerase
Type II
ORF Gene Most similar Specificity Name
 
1005 123 aa hypothetical protein
1010 R NmeW135ORF222P (76% identity) CCTTC Nme215ORF1020P
1020 M M.Nme211II (100% identity) CCTTC M.Nme215ORF1020P
13350 IS5/IS1182 family transposase
 
1030 ATP-dependent DNA helicase DinG
1035 R Nme9714ORF1637P (100% identity) Nme215ORF1040P
1040 M M.Nme9714ORF1637P (100% identity) M.Nme215ORF1040P
1045 DUF533 domain-containing protein
 
2280 dTDP-glucose 4,6-dehydratase
??? M M.Nme91543ORF4570P (100% identity) GGTGA M1.Nme215ORF2290P
2290 M M1.NmeMC58ORF76P (100% identity) GGTGA M2.Nme215ORF2290P
2295 RNA-binding transcriptional accessory protein
 
3255 83 aa hypothetical protein
3260 M M.Nme9714ORF2020P (100% identity) M.Nme215ORF3260P
3265 R Nme9714ORF2020P (100% identity) Nme215ORF3260P
3270 cysteine--tRNA ligase
 
13610 alpha-amylase
3760 M M.NmeA153ORF2278P (100% identity) CCGG M.Nme215ORF3760P
3765 R NmeAIP (100% identity) CCGG Nme215ORF3760P
3770 V very short patch repair endonuclease V.Nme215ORF3760P
3775 DUF3418 domain-containing protein
 
4470 leucine--tRNA ligase
4475 M M1.Nme98ORF45P (100% identity) GATC M1.Nme215ORF4475P
4480 M M2.Nme98ORF45P (100% identity) GATC M2.Nme215ORF4475P
4485 184 aa hypothetical protein
 
6400 76 aa hypothetical protein
6405 M DNA cytosine methyltransferase GCGCGC M.Nme215ORF6405P
6410 R restriction endonuclease GCGCGC Nme215ORF6405P
6415 alanine--tRNA ligase
 
10910 ADP-glyceromanno-heptose 6-epimerase
10915 R Nme9714ORF1079P (100% identity) TCTGG Nme215ORF10920P
10920 M M.Nme9714ORF1079P (100% identity) TCTGG M.Nme215ORF10920P
10925 D-glycero-beta-D-manno-heptose-7-phosphate
Type III
ORF Gene Most similar Specificity Name
 
7870 alpha-hydroxy-acid oxidizing protein
7875 R Nme211ORF10460P (100% identity) Nme215ORF7880P
7880 M M.Nme211ORF10460P (100% identity) M.Nme215ORF7880P
7890 tRNA pseudouridine(55) synthase TruB
 
8565 peptidylprolyl isomerase
8570 M site-specific DNA-methyltransferase M.Nme215ORF8570P
8575 R Nme211ORF11150P (100% identity) Nme215ORF8570P
8580 tRNA 2-thiocytidine(32) synthetase TtcA