Neisseria lactamica Y92-1009 |
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Putative Neisseria lactamica Y92-1009 RM systems
Ref: Pandey,A.K. and Read,R.C. unpublished
REBASE ref # 24759
Complete sequence: 2,146,723 bp
GenBank #: CP019894
REBASE acronym: Nla1009
Org_num: 23628
All begin B2G52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6190 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 6195 | M | M.Nla17106ORFOP (99% identity) | M.Nla1009ORF6195P | |
| 6200 | DNA-damage-inducible D domain protein | |||
| 6205 | S | S2.Nla10618II (98% identity) | S.Nla1009ORF6195P | |
| 6210 | R | Nla10618IIP (99% identity) | Nla1009ORF6195P | |
| 6215 | ATP-dependent Clp protease ATP-binding subunit | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1540 | L-serine ammonia-lyase | |||
| 1545 | M | M.NlaY92ORF28560P (100% identity) | CCNGG | M.Nla1009ORF1545P |
| 1550 | R | NlaY92ORF28560P (100% identity) | Nla1009ORF1545P | |
| 1555 | modification methylase | |||
| 1550 | restriction endonuclease | |||
| 1555 | M | M.NlaY92ORF28600P (100% identity) | CATG | M.Nla1009ORF1555P |
| 1560 | R | NlaCORFQP (100% identity) | CATG | Nla1009ORF1555P |
| 1565 | 135 aa hypothetical protein | |||
| 3025 | 3-hydroxyisobutyrate dehydrogenase | |||
| 3030 | M | M.Nme9714ORF1637P (100% identity) | M.Nla1009ORF3030P | |
| 3035 | R | NlaA7515ORF1347P (99% identity) | Nla1009ORF3030P | |
| 3040 | ATP-dependent DNA helicase DinG | |||
| 3045 | 100 aa hypothetical protein | |||
| 3050 | M | M.Nme212ORF2225P (99% identity) | CCTTC | M.Nla1009ORF3050P |
| 3055 | R | Nme8554IP (98% identity) | Nla1009ORF3050P | |
| 3060 | 123 aa hypothetical protein | |||
| 3170 | ATP-dependent helicase | |||
| 3175 | M | M.NlaA7515ORF1374P (99% identity) | M.Nla1009ORF3175P | |
| ??? | R | NlaA7515ORF1374P (100% identity) | Nla1009ORF3175P | |
| 3190 | ATP-dependent RNA helicase HrpA | |||
| 3540 | methionine ABC transporter ATP-binding protein | |||
| 3545 | RM | SAM-dependent methyltransferase | CATCAC | Nla1009ORF3545P |
| 3550 | 287 aa hypothetical protein | |||
| 3815 | leucine--tRNA ligase | |||
| 3820 | R | NmeNL4627P (84% identity) | Nla1009ORF3820P | |
| 3825 | DNA adenine methylase | |||
| 5605 | 78 aa hypothetical protein | |||
| 5610 | V | V.NlaY92ORF16400P (100% identity) | V.Nla1009ORF5615P | |
| 5615 | M | M.Nla10618ORF340P (96% identity) | M.Nla1009ORF5615P | |
| 5620 | phenylalanine--tRNA ligase subunit beta | |||
| 6175 | D-glycero-beta-D-manno-heptose-7-phosphate | |||
| 6180 | M | M.NlaCORFHP (100% identity) | CCAGA | M.Nla1009ORF6180P |
| ??? | R | NlaCORFHP (100% identity) | Nla1009ORF6180P | |
| 6190 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 6780 | 65 aa hypothetical protein | |||
| 6785 | M | M.NlaCORFRP (94% identity) | CCGCGG | M.Nla1009ORF6785P |
| 6790 | R | Nla17106ORFCP (96% identity) | Nla1009ORF6785P | |
| 6795 | excinuclease ABC subunit A | |||
| 8320 | 3-isopropylmalate dehydratase small subunit | |||
| 8325 | M | M.NlaIV (99% identity) | GGNNCC | M.Nla1009ORF8325P |
| 8330 | R | NlaIV (100% identity) | GGNNCC | Nla1009ORF8325P |
| 8335 | 3-isopropylmalate dehydrogenase | |||
| 10260 | alanine--tRNA ligase | |||
| 10265 | R | restriction endonuclease | GCGCGC | Nla1009ORF10270P |
| 10270 | M | DNA cytosine methyltransferase | GCGCGC | M.Nla1009ORF10270P |
| 10275 | phosphoglyceromutase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6400 | phosphatidylinositol kinase | |||
| 6405 | M | M.Nla17106ORFBP (95% identity) | M.Nla1009ORF6405P | |
| 6410 | 65 aa hypothetical protein | |||
| 6415 | R | NlaCORFKP (99% identity) | Nla1009ORF6405P | |
| 6420 | Rho GTPase-activating protein 19 | |||
| 8380 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 8385 | R | Nme198ORF822P (98% identity) | CCACC | Nla1009ORF8390P |
| ??? | M | M.Nme777ORF11900P (96% identity) | M.Nla1009ORF8390P | |
| 8395 | peptidylprolyl isomerase | |||
| 9055 | 75 aa hypothetical protein | |||
| ??? | M | M.Nbe329ORFKP (91% identity) | M.Nla1009ORF9060P | |
| 9070 | R | Nla17106ORFLP (98% identity) | Nla1009ORF9060P | |
| 9075 | alpha-hydroxy-acid oxidizing enzyme | |||