Escherichia coli AR_0104 |
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Putative Escherichia coli AR_0104 RM systems
Ref: Conlan,S. et al. unpublished
REBASE ref # 23638
| Sequence length: | GenBank #: | |
| Chromosome: | 4,992,088 bp | CP020116 |
| plasmid unitig_5: | 107,210 bp | CP020117 |
| plasmid unitig_6: | 111,212 bp | CP020118 |
| plasmid unitig_7: | 51,515 bp | CP020119 |
REBASE acronym: Eco0104
Org_num: 22837
All begin AM483_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18580 | 267 aa hypothetical protein | |||
| 18585 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco0104ORF18590P |
| 18590 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco0104ORF18590P |
| 18595 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco0104ORF18590P |
| 18600 | 52 aa hypothetical protein | |||
| 20485 | restriction endonuclease | |||
| 20490 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.Eco0104ORF20490P |
| 20495 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.Eco0104ORF20490P |
| 20500 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | Eco0104ORF20490P |
| 20505 | 112 aa hypothetical protein | |||
| plasmid unitig_5 | ||||
| 26850 | prevent-host-death family protein | |||
| ??? | M | M.SenceORFJP (100% identity) | M.Eco0104ORF26855P | |
| 26860 | S | S.SenBR076ORFFP (100% identity) | S.Eco0104ORF26855P | |
| 26865 | HsdR protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 315 | cell division protein DamX | |||
| 320 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0104DamP |
| 325 | ribulose-phosphate 3-epimerase | |||
| 935 | transporter | |||
| 940 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco0104ORF940P |
| 945 | Fis family transcriptional regulator | |||
| 12405 | 92 aa hypothetical protein | |||
| 12420 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco0104ORF12420P |
| 12425 | TrmB family transcriptional regulator | |||
| 14825 | transcriptional regulator | |||
| 14830 | M | M.KpnYN1ORFGP (89% identity) | M.Eco0104ORF14830P | |
| 14835 | 71 aa hypothetical protein | |||
| 20880 | restriction endonuclease | |||
| 20885 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco0104ORF20890P |
| 20890 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco0104ORF20890P |
| 20895 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.Eco0104ORF20890P |
| 20900 | 83 aa hypothetical protein | |||
| plasmid unitig_5 | ||||
| 26935 | 0 aa hypothetical protein | |||
| 26940 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco0104ORF26940P |
| 26945 | 73 aa hypothetical protein | |||
| plasmid unitig_7 | ||||
| 27915 | glutathione S-transferase | |||
| 27920 | R | YpsR1ORFAP (100% identity) | CCWGG | Eco0104ORF27925P |
| 27925 | M | M.UbapDS2ORFAP (100% identity) | CCWGG | M.Eco0104ORF27925P |
| 27930 | transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20870 | 60 aa hypothetical protein | |||
| 20875 | R | EcosS3McrBP (100% identity) | Eco0104McrBP | |
| 20880 | R | EcosS9McrCP (100% identity) | Eco0104McrCP | |
| 20885 | restriction endonuclease | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unitig_6 | ||||
| 27585 | transposase | |||
| 27590 | M | M.Sso524ORF460P (100% identity) | M.Eco0104ORF27590P | |
| 27595 | 76 aa hypothetical protein | |||